| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06198 |
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| Symbol | fliR |
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| ID | 6306298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2849448 |
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| End bp | 2850221 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642640059 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001913918 |
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| Protein GI | 188576989 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.305081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGATCG ACGGCCAGCG CGCGTTCGCG ATGGTCGGGG CGATCATGTG GACCATGCTG
CGTACCGGTG CGTTGCTCAC CGCTATGCCG TTGATCGGCA CGCGCGCCGT GCCCGGACGG
GTGCGGGTGA TGCTGGCCGG GACGCTGGCA ATGGTGCTGG CGCCGATCCT GCCGCCGGTG
CCGGAGTGGG ACGGTTTTAC CGCACAGGCG GTGCTGAGCA TCGCGCGCGA GCTGGCGATC
GGGGCCAGCA TGGGCTTCAT GCTGAAGCTG ATTTTCGAAG CCGGCGCATT GGCCGGCGAG
CTGGTGTCGC AGTCCACCGG CCTGTCGTTC GCACAGATGT CCGACCCCAT GCGCGGCGTG
ACGTCGGGCG TGATCGCGCA GTGGTTCTAC ATCGGCTTCG GGCTGCTGTT CTTCGCGGCT
AACGGCCATC TGGCGGTGAT CGCACTGCTG GTGGATAGCT ATAAAGCCTT GCCGATCGGC
ACCGCATTGC CCGATGCCGG CGCATTCGCC GAAGTAGCGC CCACCCTGTT TCTGCAGATC
CTGCGCGGCG GGCTGACCCT GGCGTTGCCG ATGATGGTGG CGATGCTGGC GGTCAACCTG
GCCTTCGGCG CGCTGTCCAA GGCCGCGCCG GCGTTGAATC CGGTGCAGTT GGGCTTGCCG
CTGACGGTGT TGCTGGGGCT GTTCCTGTTG TCGAGCTTCG CCAGCGAATT CGCCCCCCCT
GTGCAGCGCA TGTTCGATAC CGCATTCGAC GCCGCCAGAA AATTGACCGC GTAG
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| Protein sequence | MVIDGQRAFA MVGAIMWTML RTGALLTAMP LIGTRAVPGR VRVMLAGTLA MVLAPILPPV
PEWDGFTAQA VLSIARELAI GASMGFMLKL IFEAGALAGE LVSQSTGLSF AQMSDPMRGV
TSGVIAQWFY IGFGLLFFAA NGHLAVIALL VDSYKALPIG TALPDAGAFA EVAPTLFLQI
LRGGLTLALP MMVAMLAVNL AFGALSKAAP ALNPVQLGLP LTVLLGLFLL SSFASEFAPP
VQRMFDTAFD AARKLTA
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