Gene PXO_06184 details

Gene Information

• Locus tag: PXO_06184
• Symbol: fliE
• ID: 6306284
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 2838533
• End bp: 2838904
• Gene Length: 372 bp
• Protein Length: 123 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642640045
• Product: flagellar hook-basal body complex protein (FliE)
• Protein accession: YP_001913904
• Protein GI: 188576975
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1677] Flagellar hook-basal body protein
• TIGRFAM ID: [TIGR00205] flagellar hook-basal body complex protein FliE

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.000899406
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACT CCGTTACCTC CATCCTCTCG CAGATCCGCA GCTACCAGAC GCAGATGGGC 
CAAGGCCCGA TGCGCGCGGT GGGCGATGCG GCGCGCGGCA ACCAGATCCA GGGACTGGCC 
GGCGCACAGG GAACACCGGC CACCCAGGCA TCGAGCTTCA GCGAGACCTT GCGCAGCGCC 
ATCGGTGGCG TCAACGAGGC CCAGCAGAGG GCCGGCGCCC TGTCCAAAGC ATTCGAAATG 
GGCGACCCCA ATGCCGATCT GGCACGGGTC ATGGTCGCCT CCCAGCAGTC CCAGGTGGCC 
TTCCGCGCCA CCGTGGAAGT CCGCAACCGT CTCGTCCAGG CTTATCAGGA CGTCATGAAC 
ATGCCGCTGT AA 

 

Protein sequence

MSDSVTSILS QIRSYQTQMG QGPMRAVGDA ARGNQIQGLA GAQGTPATQA SSFSETLRSA 
IGGVNEAQQR AGALSKAFEM GDPNADLARV MVASQQSQVA FRATVEVRNR LVQAYQDVMN 
MPL