| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_06140 |
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| Symbol | mnmA |
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| ID | 6306240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2789901 |
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| End bp | 2791037 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642640001 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001913860 |
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| Protein GI | 188576931 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.478788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGC CGCACATTGT GGTAGGCGTG TCTGGCGGCG TGGATTCGTC GGTGGCCGCA
TGGAAGCTGG CGCAGCAGGG CGAGCCGATC GCCGGGCTGT TCATGCAGAA TTGGGCCGAC
GACGGCAGCG GCGATTGCCG CGCCGAAGAC GATCGCCGCG ACGCGGTCGC GGTCTGCGGC
GTGCTGGGTA TGCCGTTTCA TTTCCGCGAC TTCTCCGGCG AATACTGGAG CGGCGTGTTC
GAGCATTTCC TGGCCGAATA CGCGGCCGGG CGCACGCCTA ACCCGGACGT GTTGTGCAAC
CGCGAAGTCA AGTTCAAGCA TTTTCTCGAC GCAGCGCAGG CGCTCGGCGC AGAGCGCATC
GCCACCGGCC ATTACGCGCA GGTGGCGCAT CGCGGCGGGC GCTGGCGCCT GTTGCGTGGC
GCCGACCGCG ACAAGGACCA GAGCTATTTT TTGCATCAGC TGGGACAGAG CCAGCTGGCG
GCGACGCTCT TCCCGATCGG CGATCTGGAA AAAAGCACGC TGCGTCGAAT CGCCCGGGAC
GCCGGCTTGC CGACCCACGC CAAGAAGGAT TCCACCGGCA TCTGCTTCAT CGGCGAGCGC
GATTTCCGCG AATTTCTGGG CCGCTACCTG CCCGCGCGCA CCGGCGAGAT CCGCGACCCG
CAGGGGCAGC GCATCGCCGA GCATCCTGGG GTGTTCTACT TCACCCTGGG TCAGCGCGAG
GGGCTGAACA TCGGCGGCGT GCGCGGGCGT GCTGCCGCGC CGTGGTACGT GGTTGGCAAG
GATGTGGCGA GCAATGTGCT GTACGTGGAC CAGGACCGCG ACAGCCCATT GCTGCAATCG
CGCTGGCTGC AGTCCGAACA AGCCCACTGG GTGACCGGTG CGCCGCCGGC ACGCCGCTTC
AGCTGCACTG CGCAGACCCG CTACCGCCAG CCCGACGAGC CCTGCACGGT CGACGTGCAG
GACGATGGCA GCGTGCAGGT GCACTTCGAA CGGCCGCAAC GGGCGGTGAC GCCGGGGCAG
TCGCTGGTGC TGTACGACGG CAAGGAATGC CTGGGCGGTG CCGTCATCGC CGCCACCGAC
GCACCGCTGG AACGCCAGTT GGCGGGATCT TCTTTTTCCT CCGAGGTAGT GGCTTGA
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| Protein sequence | MSTPHIVVGV SGGVDSSVAA WKLAQQGEPI AGLFMQNWAD DGSGDCRAED DRRDAVAVCG
VLGMPFHFRD FSGEYWSGVF EHFLAEYAAG RTPNPDVLCN REVKFKHFLD AAQALGAERI
ATGHYAQVAH RGGRWRLLRG ADRDKDQSYF LHQLGQSQLA ATLFPIGDLE KSTLRRIARD
AGLPTHAKKD STGICFIGER DFREFLGRYL PARTGEIRDP QGQRIAEHPG VFYFTLGQRE
GLNIGGVRGR AAAPWYVVGK DVASNVLYVD QDRDSPLLQS RWLQSEQAHW VTGAPPARRF
SCTAQTRYRQ PDEPCTVDVQ DDGSVQVHFE RPQRAVTPGQ SLVLYDGKEC LGGAVIAATD
APLERQLAGS SFSSEVVA
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