Gene PXO_06115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_06115 
SymboltetR 
ID6306218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2762980 
End bp2763612 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID642639979 
Producttranscriptional regulator TetR family 
Protein accessionYP_001913838 
Protein GI188576909 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.131749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGT CCGCCCACTT CTCCACGAAG GACCGCATTC TCGGTGCGGC CGAGGAGCTG 
TTCGCCCAGC ACGGGTTCGC CGGCACGTCG CTGCGCCAGC TGACCACTCA GGCCGACGTC 
AATATCGCTG CGGTCAATTA CCACTTCGGC TCCAAGGAAA ACCTGGTCAA CGAGGTGTTC 
CGCCGGCGCA TGGACGAGAT GACCACGGCG CGGTTGCAGC AGCTGGAAGC GGCAAAGAAG 
TCGCAACCCG GCGAGCTCAC CGCGGTACTG GCGGCGTTTG TCGAGCCGGC GCTGGCAATG 
GCGCAGGACC GCCAGAACGG CGGCGCCTTC GTTCGCGTGA TCGCACGCGC CTACGCGGAA 
AAAAACGACA ACTTGCGCAA GTTCCTGTCC GATCACTACG GCCATGTCCT GCGCGAATTC 
GGCAAGGCCA TCACCGGCTG CGTGCCGGGC CTGAGCAAGG AAGAGCTGTA CTGGCGACTG 
GACTTCCTCG CCGGTGCGCT GACCTATGCC ATGGCCGATT TCGGCCTCAT CAAGCGGCCT 
GCGGGCGTCA GCGAGGCCGA TCACCGCGCG CGTGCCGCGC GCGAACTCAT TCGTTTCGCG 
GAACCCGGTT TCCGTGCTCA CTCCACACCG TAA
 
Protein sequence
MPKSAHFSTK DRILGAAEEL FAQHGFAGTS LRQLTTQADV NIAAVNYHFG SKENLVNEVF 
RRRMDEMTTA RLQQLEAAKK SQPGELTAVL AAFVEPALAM AQDRQNGGAF VRVIARAYAE 
KNDNLRKFLS DHYGHVLREF GKAITGCVPG LSKEELYWRL DFLAGALTYA MADFGLIKRP 
AGVSEADHRA RAARELIRFA EPGFRAHSTP