Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_06055 |
Symbol | |
ID | 6308484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 5082193 |
End bp | 5083038 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642642201 |
Product | integrase core domain protein |
Protein accession | YP_001916031 |
Protein GI | 188579102 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.130337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAGCG CACCGGCGCG TCGTGCGCTG GTGCGCGAGT GGATCGAAGG TGGCGCCAGT GAGCGCTGCG CCCTGGCAGC GATCGGCAAT AGCGCCAGTG CGCTGCGCTA TCGCCCGCGC GAGGACCGCA ACGTTGAGCT GCGCGAGCAC AGTGTTGCGT TGGCGCATCG CCATCGCCGC TACGGCGTGG GGATGATCTC TCTCAAGCTG CGGCAGGAAG GTCGTCTCGT GAACTATAAG CGGGTAGAGC GGCTGTATTG CGAGCAGCAG CTGCAGGTCC GCCGCCGCAC GCGTAAAAAG GTGCCGGTAG GCGAGCGTGC GCCGTTGCTG CGGCCCACCA AGGCCAACCC GGTGTGGTCG ATGGACGTCG TGTTCGACCG CACCGCCGAA GGTCGGGCGA TCAAGTCTCT GGTGATCGTG GACGACGCGA CACACCAGGC AGTCGCCATC GACGTGGAAC GCGCCATCTC CGGCCACGGG GTAGCACGCG TGCTGGATCG GTTGGCACAC AGTCGTGGCC TGCCGAAGGT GATTCGCACG GACAACGGCA AGGAGTTCTG TGGCAAGGCC ATGGTCGCCT GGGCGCATGC CAATCGTGTG CAGCTACGCC AGATCCAGCC TGGCAAGCCG AACCAGAATG CCTATGTCGA ATCCTTCAAC GGCCGGCTAC GCGACGAATG CCTCAACGAA CATGGGTTCC CAACGCTGCT GCATGCGCGC ACCGAGATCG AACGCTGGCG CCGCGAATAC AACCAACACC GCCCAAAGAA AGCAATCGGC GCAATGACGC CGGCAACGTA TGCCCAGCAG TTGGCCAATA GCGAGATCAT CCCCCCCGGA CTCTAA
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Protein sequence | MVSAPARRAL VREWIEGGAS ERCALAAIGN SASALRYRPR EDRNVELREH SVALAHRHRR YGVGMISLKL RQEGRLVNYK RVERLYCEQQ LQVRRRTRKK VPVGERAPLL RPTKANPVWS MDVVFDRTAE GRAIKSLVIV DDATHQAVAI DVERAISGHG VARVLDRLAH SRGLPKVIRT DNGKEFCGKA MVAWAHANRV QLRQIQPGKP NQNAYVESFN GRLRDECLNE HGFPTLLHAR TEIERWRREY NQHRPKKAIG AMTPATYAQQ LANSEIIPPG L
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