| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_05780 |
|---|
| Symbol | |
|---|
| ID | 6308458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 5063851 |
|---|
| End bp | 5065239 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642642176 |
|---|
| Product | ISXo8 transposase |
|---|
| Protein accession | YP_001916006 |
|---|
| Protein GI | 188579077 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5659] FOG: Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTACAAA TAATCGTACC TTTGTGCCAC TATTGGAAGA CCTTCAGGCC GCGCGGGAGA
GCTGTGTTGA ATAGGACACT GGAAGTGCGT TTTGAACAGT ACGGGGAAGT AGTTGCTGCG
GCCCTGTCCC ATGCGGATCG CAAACAGCCC GCACACTGGT ACCTGAAGGG GTTGCTACTG
CCTGGAGGGC GCAAGAGCGT GGAGCCCATG GCCGCGCGGG TGCACCCGCA GAACGTGCGC
TCAGCCCATC AATCGATGCA CCATCTGGTG GCCGATGCCG ACTGGAGCGA TCAAGCGCTG
CTGGCGGTGG CGGCGGCGGC GGCACAGGTG CTGCCGCCCC TGAGCAGGAA GAGCGCAGCG
TGTCACTGGA TCGTGGACGA CACGGGATTT TCAAAGAAGG GGGTGCATTC GGTCGGTGTT
GCACGCCAGT ACTGCGGCCG CCTTGGCAAG ACGGACAATT GCCAGGTTGC CGTGAGTTTG
TCGATCGCCA ACGAACACGG CAGCCTGCCA GTGGGCTATC GGCTGTATCT TCCCGAGCAG
TGGGCTCAGG ACACTGTGCG GCGCAAGAAG GCAGGCGTTC CGGATCAGGT CGTGTTTCAG
ACCAAGACAG CGCTGGCCAT GGATCAGATC GACAGCGCGC TGGCGACAGG GATTGCGGCA
GGCGTCGTGC TAGCCGATGC GGCCTACGGC ACCGAGACCC ACTGGCGAGA CCAGCTCAGC
GAACGCGGCC TGCTGTACAT GGTTGGCGTC CGCAGCAACA CGAAGGTCTG GTGGGGATCG
CACCAACCTG CGCCCATGCC GCCAGCCAGC CCTAAGGGCG GTCGGCCCCG CACACGACCG
ATGCGCGATA GCGCACATGC GCCGATCTCG GTACATGAAG TCGCGCAGAG CTTGCTCGCA
AGGACGTATC GGCAGGTCAG CTGGCGCCAG GGCAGCGACG CAACGCTCAG TTCGCGGTTC
GCGGCGGTGC GGGTTCGTGC CGCACACAAT TGCCAGGCAC ATGACGAGCA GTGGCTGCTG
ATCGAGTGGC CGCCGGGAGA GTCCGAGCCC CGCCACTACT GGTTCTCGAC GCTACCAAAG
CAAACGCCGG TCAAGACACT GGTTGCCACG GCACAAGGCC GATGGCGGAT TGAACGCGAT
TATCAGGAGC TGAAGTCGGA GTTGGGCCTG CATCACTATG AAGGGCGCAA CTGGCGTGGT
TTTCACCATC ACGCCAGTCT GTGCATCGCC GCATACGGGT TCTTGATGCG CGAGCGCCTG
CGCAGTAAAA AAAACTCCGT CGCATTCAAG ATGCCTGCAG TATCCAAAAG CGTCCGCCCG
CGCCGGTCTG GCCCCAATGC AACGTCACCA TCCCAACTCG ATTGCCACGC TGGCCTTCGG
ACTGGCTAG
|
|---|
| Protein sequence | MLQIIVPLCH YWKTFRPRGR AVLNRTLEVR FEQYGEVVAA ALSHADRKQP AHWYLKGLLL
PGGRKSVEPM AARVHPQNVR SAHQSMHHLV ADADWSDQAL LAVAAAAAQV LPPLSRKSAA
CHWIVDDTGF SKKGVHSVGV ARQYCGRLGK TDNCQVAVSL SIANEHGSLP VGYRLYLPEQ
WAQDTVRRKK AGVPDQVVFQ TKTALAMDQI DSALATGIAA GVVLADAAYG TETHWRDQLS
ERGLLYMVGV RSNTKVWWGS HQPAPMPPAS PKGGRPRTRP MRDSAHAPIS VHEVAQSLLA
RTYRQVSWRQ GSDATLSSRF AAVRVRAAHN CQAHDEQWLL IEWPPGESEP RHYWFSTLPK
QTPVKTLVAT AQGRWRIERD YQELKSELGL HHYEGRNWRG FHHHASLCIA AYGFLMRERL
RSKKNSVAFK MPAVSKSVRP RRSGPNATSP SQLDCHAGLR TG
|
|---|
| |