| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_05727 |
|---|
| Symbol | |
|---|
| ID | 6307549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 4156708 |
|---|
| End bp | 4157127 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642641287 |
|---|
| Product | ISXoo12 transposase |
|---|
| Protein accession | YP_001915135 |
|---|
| Protein GI | 188578206 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCA CGCCAGCACA ATTTGCACTC ATCGAGCATT GCCTACCTTT GCAACGCGGC
AATGTCAGCA TGACCAACCT GCAGGTAGTC AACGCCCTTC TTTACGTCGC AGAGCATGGC
TGCAAATGGC GCGGTCTGCC CGAGCGCTTT GGCAACTGGC ATACGGTGTA CACGCGCATT
AACCGTTGGG CCAAGTCCGG TGTGCTGGAC CGGATGTTCG CCCAATTGCA GACCTGCCAG
ATCGTGCGCA TCAAAATCGA AGCGGTCTCG CTGGACTCCA CCAGCATCAA GGTGCATCCG
GATGGCACTG GCGCATTAAA AAAAACGGCC CACAATCCAT CGGGAAATCG CGCGGCGGAT
GGAACACCAA AATTCATATG GTTGCCGCAG ATGCTCGAAC AGCCATCACG TTCGGATTGA
|
|---|
| Protein sequence | MEITPAQFAL IEHCLPLQRG NVSMTNLQVV NALLYVAEHG CKWRGLPERF GNWHTVYTRI
NRWAKSGVLD RMFAQLQTCQ IVRIKIEAVS LDSTSIKVHP DGTGALKKTA HNPSGNRAAD
GTPKFIWLPQ MLEQPSRSD
|
|---|
| |