Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_05690 |
Symbol | |
ID | 6307181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 3758940 |
End bp | 3760322 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642640927 |
Product | ISXo8 transposase |
Protein accession | YP_001914775 |
Protein GI | 188577846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTACAAA TAATCGTATC TTTGTGCCAC TATTGGAAGA CCTTCAGGCC GCGTGGGAGA GCTGTGTTGA ATAGGTCACT GGAAGTGCGT TTTGAACAGT ACGGGGAAGT AGTTGCTGCC GCCCTGTCCC ATGCGGATCG CAAACAGCCC GCACACTGGT ACCTGAAGGG GTTGCTACTG CCTGGAGGGC GCAAGAGCGT GGAGCCCATG GCCGCGCGGG TGCACCCGCA GAACGTGCGC TCAGCCCATC AATCGATGCA CCATCTGGTG GCCGATGCCG ACTGGAGCGA TCAAGCGCTG CTGGCGGCGG TGGCGGCACA GGTGCTGCCG CCCCTGAGCA GGAAGAGCGC AGCGTGTCAC TGGATCGTGG ACGACACGGG ATTTTCAAAG AAGGGGGTGC ATTCGGTCGG TGTTGCACGC CAGTACTGCG GCCGCCTTGG CAAGACGGAC AATTGCCAGG TTGCCGTGAG TTTGTCGATC GCCAACGAAC ACGGCAGCCT GCCAGTGGGC TATCGGCTGT ATCTTCCCGA GCAGTGGGCT CAGGACACTG TGCGGCGCAA GAAGGCAGGC GTTCCGGATC AGGTCGTGTT TCAGACCAAG ACAGCGCTGG CCATGGATCA GATCGACAGC GCGCTGGCGA CAGGGATTGC GGCAGGCGTC GTGCTAGCCG ATGCGGCCTA CGGCACCGAG ACCCACTGGC GAGACCAGCT CAGCGAACGC GGCCTGCTGT ACATGGTCGG CGTCCGCAGC AACACGAAGG TCTGGTGGGG ATCGCACCAA CCTGCGCCCA TGCCGCCAGC CAGCCCTAAG GGCGGTCGGC CCCGCACACG ACCGATGCGC GATAGCGCAC ATGCGCCGAT CTCGGTACAT GAAGTCGCGC AGAGCTTGCC CGCAAGGACG TATCGGCAGG TCAGCTGGCG CCAGGGCAGC GACGCAACGC TCAGTTCGCG GTTCGCGGCG GTGCGGGTTC GTGCCGCACA CAATTGCCAG GCACATGACG AGCAGTGGCT GCTGATCGAG TGGCCGCCGG GAGAGTCCGA GCCCCGCCAC TACTGGTTCT CGACGCTACC AAAGCAAACG CCGGTCAAGA CACTGGTTGC CACGGCACAA GGCCGATGGC GGATTGAACG CGATTATCAG GAGCTGAAGT CGGAGTTGGG CCTGCATCAC TATGAAGGGC GTAACTGGCG TGGTTTTCAC CATCACGCCA GTCTGTGCAT CGCCGCATAC GGGTTCTTGA TGCGCGAGCG CCTGCGCAGT AAAAAAAACT CCGTCGCATT CAAGATGCCT GCAGTATCCA AAAGTGTCCG CCCGCGCGGG TCTGGCCCCA ATGCAACGTC ACCATCCCAA CTCGATTGCC ACGCTGGCCT TCGGACTGGC TAG
|
Protein sequence | MLQIIVSLCH YWKTFRPRGR AVLNRSLEVR FEQYGEVVAA ALSHADRKQP AHWYLKGLLL PGGRKSVEPM AARVHPQNVR SAHQSMHHLV ADADWSDQAL LAAVAAQVLP PLSRKSAACH WIVDDTGFSK KGVHSVGVAR QYCGRLGKTD NCQVAVSLSI ANEHGSLPVG YRLYLPEQWA QDTVRRKKAG VPDQVVFQTK TALAMDQIDS ALATGIAAGV VLADAAYGTE THWRDQLSER GLLYMVGVRS NTKVWWGSHQ PAPMPPASPK GGRPRTRPMR DSAHAPISVH EVAQSLPART YRQVSWRQGS DATLSSRFAA VRVRAAHNCQ AHDEQWLLIE WPPGESEPRH YWFSTLPKQT PVKTLVATAQ GRWRIERDYQ ELKSELGLHH YEGRNWRGFH HHASLCIAAY GFLMRERLRS KKNSVAFKMP AVSKSVRPRG SGPNATSPSQ LDCHAGLRTG
|
| |