| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_05680 |
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| Symbol | |
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| ID | 6307076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 3657883 |
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| End bp | 3658581 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642640823 |
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| Product | peptidase, S54 (rhomboid) family, putative |
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| Protein accession | YP_001914672 |
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| Protein GI | 188577743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.811656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAAC TGCCACCCAT CACCAAAGCA TTACTGATCG CCAATATCGG CTTGTTCCTG
CTGCAATGGG CAGTGGGCGA CCTGAGTGCC GGCGTGTTGC CATCGGACAG CGTGTTGTCG
TGGCTGATGT TGTGGCCTCT GTCCAACGGC TTCGATGCGT TTTCGCCGGG CGCCAGCTTC
ATGCCCTGGC AGCTGCTGAC CTACGCGTTC CTGCATGGCG GCTTCAACCA TCTGTTTTTC
AACATGCTGG CGCTTTTCAT GTTTGGTGCG CCGTTGGAGC AGACCTGGGG CCAGAAGCGC
TTTCTGACCT ATTACCTGGT GTGTGTGGCC GGTGCCGGCG TGTGTCAGCT GTTGATTGCC
TGGTTTACGC AAAGTGGGGC GCCGGTGGTG GGCGCGTCGG GCGGTGTGTT CGGCTTGCTG
CTGGCCTACG GCATGTTGTT CCCGAATCAG CGCGTGATGC TGCTGTTCCC ACCGATTCCA
ATGAAAGCGC GCACATTCGT GATTGTGTTC GGTGCGATCG AACTGTTCCT CGGTGCAACC
GGCTGGCAGC CCGGTGTTGC CCACTTCGCG CATCTGGGGG GCATGCTGTT CGGCTGGCTG
ATGATCCGCT ACTGGCGCGG TCAGTCGCCA TTTGGCGGCA GTGGTGGAAA GAAGGGCGGT
GGCAAGGGAC GCAAGCCACC GTTGCGCGTG GTGCGTTGA
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| Protein sequence | MPQLPPITKA LLIANIGLFL LQWAVGDLSA GVLPSDSVLS WLMLWPLSNG FDAFSPGASF
MPWQLLTYAF LHGGFNHLFF NMLALFMFGA PLEQTWGQKR FLTYYLVCVA GAGVCQLLIA
WFTQSGAPVV GASGGVFGLL LAYGMLFPNQ RVMLLFPPIP MKARTFVIVF GAIELFLGAT
GWQPGVAHFA HLGGMLFGWL MIRYWRGQSP FGGSGGKKGG GKGRKPPLRV VR
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