Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_05655 |
Symbol | |
ID | 6306679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 3263759 |
End bp | 3264586 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642640432 |
Product | peptidase, S54 (rhomboid) family, putative |
Protein accession | YP_001914289 |
Protein GI | 188577360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0494961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTTC AGTATTTTTT ATTATTTTCT CTAATGTTAT GCATGGCGCT GGGTTTCACA ATTGCAAGTG TCAAAACCCA TGACTTCTAT TTTGCCAAGG TAAGCGCTGC AATTATATTT TTTTTCATAT TATTAATTTT TCAATATATA ATTATTTTTC GAAAATTATC CAGGCTATGT GAATATTCTC GGTTTTTTGC ATGGTGCTAT CTGCAGCCGA GCAGGCAACC GCTTTCAATC GCGTTCATGA TGATAGCGAT CGGTGTAATT CAGCTTTGCC TGCAGACGCG CGCCGGCAGC CTTTTCAGTC TGATCGAGCA GTATGGACTT GTTTTCCAAG ATGCGCCGCA CCAACCATGG CGCTATTTCA GCGGACCTTT CCTGCATTCC GGTGTTGCAC ACTGGGCCGC CAACTTTTCT TTACTCATGG TTGCAGCCGG GCTTTGCTTC TCGCTTGGCC GGGCGCTGAT TATCTGGCTG ACGTTCTTAT CCGGGGTATT GTTGCCCGCA TTTTTGTTGA CATTCCTTCC GCATTGGGTC GGCTCGGATG CATTCCTCGG TATCTCCGGC GGAGTATTTG CATTATATGG ATGGATTGTC GGCATCTCGT TACGCAATCG TCAGATATTC CCGCCGGCTC TCTGGTGGCT GCTCGCATAT TTCGCATTGG CAACGATGCT GGCTTCCTCC TTGCTCTCCC CTCGCACGAG TTGGGTTGCG CATGCATCAG GTTTGCTGTT GGGGCTTGCG ATTGGCTTCT GGGAGATAGG GTTCAAGCAT GAGCTTAAAA ACCCAATACT GGCATCTTCA GCAACTGGAA CGAACTGA
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Protein sequence | MFFQYFLLFS LMLCMALGFT IASVKTHDFY FAKVSAAIIF FFILLIFQYI IIFRKLSRLC EYSRFFAWCY LQPSRQPLSI AFMMIAIGVI QLCLQTRAGS LFSLIEQYGL VFQDAPHQPW RYFSGPFLHS GVAHWAANFS LLMVAAGLCF SLGRALIIWL TFLSGVLLPA FLLTFLPHWV GSDAFLGISG GVFALYGWIV GISLRNRQIF PPALWWLLAY FALATMLASS LLSPRTSWVA HASGLLLGLA IGFWEIGFKH ELKNPILASS ATGTN
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