| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_05637 |
|---|
| Symbol | |
|---|
| ID | 6306162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 2712548 |
|---|
| End bp | 2713543 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642639924 |
|---|
| Product | IS1113 transposase |
|---|
| Protein accession | YP_001913783 |
|---|
| Protein GI | 188576854 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00105026 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGCGAGT TGCAGATCGA GACCCCGCGC GACCGCGCGG GCACGTTCGC GCCACAGTTG
GTGAAGAAGC GCCAGGTGCG GCTGGCGGGG ATGGAGGAGA AGATTCTGGC GTTGTACGCG
CGCGGCATGA CAACGCGCGA CATCGAGTCT GCGCTGGTGG ACGTGTATGG GGTGGAGATA
TCGCATGGGT TGATCGCACA GGTGACCGAC GCGGTGCTGG AGGAGGCGCG GGCATGGCAA
TCGAGGCCGC TGGAGGCGAT CTATCCGATC GTGTGGCTGG ACGGCATCGT GGTGAAGGTG
CAGCACAACA AGCAGGTCAT CAACAAGGCC GCGCACGTGG TGCTGGGGGT CAACCTGCGC
GGGGAGAAGG AAGTGCTTGG CCTGTGGTTG GCTGAACACG AGGGCGCCCA ATACTGGCTG
TCGGTGTTGA CCGAACTGCG TCATCGCGGC GTGCGCGACA TCTACATCGC CTGCATGGAT
GGCTTGAAGG GCCTGCCCGA AGCGGTGCAA GCGGTGTTTC CGCAGACGCT CACGCAACTG
TGCATTGTGC ATTTGGTGCG GGCCAGCCTG CGCTACGTCA ACGCAGGCGA CAGCAAGGCG
GTTGTGGCTG CGCTCAAGCG CATCTATCAG TCGGCCACGG CGGAAGAAGC GGCGGCGGAA
CTGGAGGCGC TGGACACGCA GTGGGGCGAC AAATACCGTG CGGTGGTCCG CTTGTGGCGG
GGCAACTGGG ACAACATCAT CCCGTTCTTG CAGTTCGTGC CGCAGATCCG CAAGGTGATC
TACACCACCA ATGCCATCGA ATCGTTGAAC ATGGTCATGC GCAAGCTCAC CCGCAACCGG
CGTATTTTCC CCAACGACGA TTCGGCGCTC AAATCGTTGT TTTTGGCCGT GCGCGAGGCA
TCGAAGAACT GGCGGTCCAT CCATCACTGG AAACCGGCTC TGCAAAGCTT CCAGGTGATG
TTCGGCGAAG AACGCGTGCC GATGAATGCG CTATGA
|
|---|
| Protein sequence | MGELQIETPR DRAGTFAPQL VKKRQVRLAG MEEKILALYA RGMTTRDIES ALVDVYGVEI
SHGLIAQVTD AVLEEARAWQ SRPLEAIYPI VWLDGIVVKV QHNKQVINKA AHVVLGVNLR
GEKEVLGLWL AEHEGAQYWL SVLTELRHRG VRDIYIACMD GLKGLPEAVQ AVFPQTLTQL
CIVHLVRASL RYVNAGDSKA VVAALKRIYQ SATAEEAAAE LEALDTQWGD KYRAVVRLWR
GNWDNIIPFL QFVPQIRKVI YTTNAIESLN MVMRKLTRNR RIFPNDDSAL KSLFLAVREA
SKNWRSIHHW KPALQSFQVM FGEERVPMNA L
|
|---|
| |