| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_05631 |
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| Symbol | |
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| ID | 6306125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2668627 |
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| End bp | 2672664 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642639888 |
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| Product | RHS Repeat family |
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| Protein accession | YP_001913748 |
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| Protein GI | 188576819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000440631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCG GACAGACCAG CGTCAGCGGT CAGGTGCTGC TGGTGAATAG CCGACCGCTT
GCCGGCGTCG AGGTCAGCGT CGGATCGCGC AAGACACGTA CCGATCCGAT AGGGCGGTTC
GTGCTCACCG GTATCGCCCA AGGTCACCAG GAACTTTATG TCGATGGCAG CGCCGCAAAC
ACTGCAGGGC GTGAGTATGG GCAATTCGTC GTTGGTATCG ATCTTCAGGC CGGTCAGCTC
ACACGCTTGA CCTACACCAT GTACATGCCG CAAATCAGTG CGCGCGACAA GACGAGGATT
GCTTCGCCGT TGAAGCAGGA TGTGGTGGTG ACCCATCCAG ACATCCCGGG ACTGCAGATT
CATATTCCTG CCGGTACCGT GATCCGCGAT CGCAAGGGAA ACCTGGTGCA TGAGTTGGCC
ATCGTGCCTA CGCCGGTCAA TCGCGCCCCA TTTCCATTGC CGGCGAACTA TCCAATGTAT
TTCACGTTGG AGCCGGGTGG TGCATTGATC CAGGGCCTGA CCCCGCAAGC GGCACAAGGC
GTCCAGGTGC TGTATCCCAA CTACGACAAA TTGGCGACCG GAACCCAGGC CAATTTCTGG
ATATATCAAC CGTCCGAGGG CTGGCGGGTC TATGGCAAGG GACGGGTCAC GTCCGATGGC
ACCCGCATCG CGCCGGAAGC CGGAGTGGGC CTATACCAGG CGATGGGAGC AAGTTACAGC
GTCGACACCA ATTCGCCGCC GCCCGAACCC AACAAGCCGC CGGTCACGGA CGGATGCGGT
TGCGATGGGG CGGGGGCAGG GGCCACAGCG GGCGATCCCA TCGACTTATA TACGGGAGAG
TTTTCCTACG ATGAGACCGA CGCAGTCGTT CGCGGGCTGG TACCCATCTC GATATCCCGT
TCCTATCGGC CAAACGACAC CATCAGTCGC GATTTCGGCA TCGGCACCGC CGCCAGCTTC
CATTACACCA TGTATTCGGC GACGACCGAC TACAACCAAC TGCAACTGGT GCTTCCCAAC
GGCGCAGCGA TCCCATTCGA TCGCCTTTCT GGAAGCGGGC TGGCTGGTCG CTGGGCACAG
TCCGGTTCCA TTTCCGGCTA TGCCGGCGCC ACCATCGAGC AGGGCACGGC CTCAGGGCAC
GGCTACTTGC TCACGCTACG CGACGGCAGC AAGATGTATT TCAACCAGTA CTCGCCAAAC
CGCTTGGAAT GGACCACCGA TCGGTTTGGC AATCGGGTTG ACTATGTCTA CGACGCGGGA
CTGGTGTCGC GCATCGTCTC TGCAAATGGA CGTTATCTGG ACATTGACTA CGACAGCGAC
AATCGGATCA GCACGATCGC TGATCCATTG GGCAATACGT GGTCCTATGT CTACGACAGC
TACGGCTATC TATCCAGCCT GACCCGCGCC GACGGCAGCA TGCGCAAGTT CACCTACAAA
CGCCGCGCCG CCACGAATAC GCTACCGCTG CAGGTGCGGC TCGAGTCCAT CTACGATGGC
AAAAACCAGC GTGTATTGCT GAATGGATTC GAGAGCGCCA ACGGTAGCTG GACTGGCCGG
GTGGTCAAAC AGACCCAGGC CGACGGCGGC GTGCTGATGA TCGACTACGC GCACGTGGAC
GGCAGCACGA CAGGTGTGCT TGTGACCAAG CCGGATGGCA GCGCGCGGCG GGTGGTGTTC
GATCAGGTCA GCCATTACCC ACTGACCGAC ACCCAGGCGT ATGGCACGGC GTTGGCGCAG
ACCACGACCT ATGAGCGCAG CGCGGGCGGG CAGATCACGG CCCGTATCGA CGCGCTGGGA
CGACGCACCG AGTACCGTTA CGACAGTGCC GGACGTACGA CGCAGATCAA AGCAATGGCC
GGTACGACAC AGGTACGTAC GACCACGTTG TCCTATACCG TCGAGGGCGA CCTCGCCACG
ATCGTCGATC CGCTGAACCG CAAGACCAGC TTCGGCTACA CGCAGCGTTG CCTGACCTCG
GTCACCAATC CGCTTGGCAA GGTGAGCAAG GCCACCTGTA ATGCCGCAGG CCAACGCCTG
AGCATGGCAG ACCCGCTGGG CCACACTACC ACCTTGACGT GGACCGGCGA AGACCTCACC
CAGGTCAGTG ACGCGTTGGG CCGGAACCTG AGGTTCCGCT ATGACGCACT GGGCCGGATG
ATCGCCTCGG CAGACGCGCA GGGCAACCTC TCGCGACGCG AGTACGATCC GTTGAGCCGC
GTGGTGAAAT CGATCGACCC ACTGGGCAAT GTAGTGGAGA CCGGCTTCGA TGCGAACGGC
AATGTCACTG CAATCCTGCT GCCGCACGGC AACGGCGTGA CGTATACATA TGACACGCGC
GACCGGCGCG TCTCGCGGAC CGACGCACTG GATCAGGTGG AGCGCTGGGT CTACGACACG
ATGGACCGCG TGGTGCGCTA TACCGACCGG CGCACGCGCG TCACCACCTA TGCCTACGAC
ACGCTGGGCC GGCTGACCAC GACCACGCTG CCGGGCATGG GCGGCACGTT GGCTGCCAGC
TACGACAGCG GCAACCGGAT GGTGGCGCTG GCCGACAGTC TTTCCGGCAC ATTGAGCTGG
ACTTACGATT CCTTCGACGA GCTCACCCAG GCCAACGGCC CGCAGGGCAT GGTCGGCTAC
ACCTATGATG CGGTGGGTCG TCGCACCGGC ATGCAGGCCG ACACGCAGGC GCAGGTGCTT
TACAGCTACG ACGTAGGCGA CCGCCTGACC GGCATCAGCC AGGGCAGCGA GTCGGTCAGC
TTCGCCTACG ACAACGCCAA TCGACTCACT AGCCAGACGC TGCCCAATCA GGTACAGACC
GTCTACACCT ACAACAACGC CAACCAGATG ACCGGCCTTG CGTGGGGCAA GGCGGGGCAG
ACGGCGTTGG GCAGCCTGGG CTATGGCTAC GACAGCATCG GCCAGTTGGT GGCGCAGACC
GGTACGCATG CGCCGCAAGC CTTGCCGCCC TCCAGCAGTG GCAATGTCTT CGACGACAAT
AATCGGCAGA CGCAGGCGAG CACTGTCGCG CTGAGCTACG ATGCCAACGG CAACCTGCTC
AGTGATGGCA GCCGCACCTA TGTCTGGGAC GACCGCGACC GACTGAGCCA GATCCAGCAG
GGCGGCACCA CGATTGCCAG TTTCAGTTAC GACGCGCTGG GCCGTCGCAT CTCAAGGAGC
GAGGCCGGCA CGACCACCAA TTATTTGTAC GACGGACAGA ATGTGGTGCA GGAAACGCAG
GGCAGCACGG TCAATCCGAT CCTGACCGGC CTGGGCATCG ATCAACGTTA CGCCCGCAAC
GACACCGGCG GGCGGACGTA CTTCCTGACC GATATGCTGG GCAGCACGCG GTTGCTGACG
GATGCGGGCG GTAGCGCTGT GCAGCGGTAT GAGTATGATC CGTATGGGGC AACCAGTCAG
AGCAGCACGG CGTATACGAA TCCGTACCAG TACACGGGGC GGGAGAAGGA TATAAACGGC
TTGTACTACT ACCGTGCGAG ATACTATCGG CCGGATTTGG GTGGTTTTAT AAGCGAGGAC
CCGATCCAAT TGGCTGGAGG AGTCAATAGC TATATGTACG CTGATGACAA TCCTGCCATT
GAAAATGACC CGTTGGGATT AACATCATGG AGTGGATATG CACATGGCGG CGGAATTAGC
GGTATCTTGG GATACCAGAA AGTGAATTAT CATTTGGTGT CAGACTGTGC ACTGGGTGAA
ATTGTAACAG TCGATATAGA TGTAAGTTAT TTAACGGGTG GTGTTGGGTC TCCAATTTCT
TATACCATAT CAAATGTGCA ATTTAATGAT CCATATGCAG GGGCTTATCC AGAATCACTA
ACAGGGACTG CGTCGTATAT GTCAGCTGGA TTTGCTGCAG GTGGTGGAGC GAGTTATGGG
ACAACTACCA TAGGTGATGC CTTCTCGAAT GTCAGCCTTG GGGGGCAAGG TGGTTGGGAT
GCAAGTATAA CTGCAGCTAT TGGCAAAGCT TCGATTGACG GCAAGCCTAT TCGTAGAAAA
TGTGGGTGTG GTAAATGA
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| Protein sequence | MATGQTSVSG QVLLVNSRPL AGVEVSVGSR KTRTDPIGRF VLTGIAQGHQ ELYVDGSAAN
TAGREYGQFV VGIDLQAGQL TRLTYTMYMP QISARDKTRI ASPLKQDVVV THPDIPGLQI
HIPAGTVIRD RKGNLVHELA IVPTPVNRAP FPLPANYPMY FTLEPGGALI QGLTPQAAQG
VQVLYPNYDK LATGTQANFW IYQPSEGWRV YGKGRVTSDG TRIAPEAGVG LYQAMGASYS
VDTNSPPPEP NKPPVTDGCG CDGAGAGATA GDPIDLYTGE FSYDETDAVV RGLVPISISR
SYRPNDTISR DFGIGTAASF HYTMYSATTD YNQLQLVLPN GAAIPFDRLS GSGLAGRWAQ
SGSISGYAGA TIEQGTASGH GYLLTLRDGS KMYFNQYSPN RLEWTTDRFG NRVDYVYDAG
LVSRIVSANG RYLDIDYDSD NRISTIADPL GNTWSYVYDS YGYLSSLTRA DGSMRKFTYK
RRAATNTLPL QVRLESIYDG KNQRVLLNGF ESANGSWTGR VVKQTQADGG VLMIDYAHVD
GSTTGVLVTK PDGSARRVVF DQVSHYPLTD TQAYGTALAQ TTTYERSAGG QITARIDALG
RRTEYRYDSA GRTTQIKAMA GTTQVRTTTL SYTVEGDLAT IVDPLNRKTS FGYTQRCLTS
VTNPLGKVSK ATCNAAGQRL SMADPLGHTT TLTWTGEDLT QVSDALGRNL RFRYDALGRM
IASADAQGNL SRREYDPLSR VVKSIDPLGN VVETGFDANG NVTAILLPHG NGVTYTYDTR
DRRVSRTDAL DQVERWVYDT MDRVVRYTDR RTRVTTYAYD TLGRLTTTTL PGMGGTLAAS
YDSGNRMVAL ADSLSGTLSW TYDSFDELTQ ANGPQGMVGY TYDAVGRRTG MQADTQAQVL
YSYDVGDRLT GISQGSESVS FAYDNANRLT SQTLPNQVQT VYTYNNANQM TGLAWGKAGQ
TALGSLGYGY DSIGQLVAQT GTHAPQALPP SSSGNVFDDN NRQTQASTVA LSYDANGNLL
SDGSRTYVWD DRDRLSQIQQ GGTTIASFSY DALGRRISRS EAGTTTNYLY DGQNVVQETQ
GSTVNPILTG LGIDQRYARN DTGGRTYFLT DMLGSTRLLT DAGGSAVQRY EYDPYGATSQ
SSTAYTNPYQ YTGREKDING LYYYRARYYR PDLGGFISED PIQLAGGVNS YMYADDNPAI
ENDPLGLTSW SGYAHGGGIS GILGYQKVNY HLVSDCALGE IVTVDIDVSY LTGGVGSPIS
YTISNVQFND PYAGAYPESL TGTASYMSAG FAAGGGASYG TTTIGDAFSN VSLGGQGGWD
ASITAAIGKA SIDGKPIRRK CGCGK
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