Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_05630 |
Symbol | |
ID | 6306012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 2538652 |
End bp | 2539887 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642639775 |
Product | ISXoo13 transposase |
Protein accession | YP_001913635 |
Protein GI | 188576706 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.699256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCCA AGGTGTTTGA AGCGGCGCTG GGGATCGGCG CGCCGTGGTC GGTAGGCGCG GTCGAGTTCG ACGAAGCGAC CAAGGTGTTG ACGGTGCCGG TGGACTTCAA GCCGGGCACG AGGTTCAAGG TATCGGGCCA AAAGGGGCTG CATCCGGTTC ATGACACCGT GGTCAAGACC TACCGGCACC TGAACTTTTT CCAGCACGAG TGCTACCTGA AGGTTCGCAC GCCGCGTGTG AAGCTTGGGG ACGGATCGGT TCGCCTGGTC GAGCCGGACT TCGCTGGGCG GTTGTCGGGC TTCACGCTGT TGTTCGAGGC GCTGGTGCTG ATGTTGTCGC AGCAGATGCC GTTCGCGGCC GTTGCGCGCA TCGTGGGCGA GTCGGCGTAC CGGTGCATGC AGGTGTGCAA CCGCTATGTC GAGATGGCCC TGGAGCAGGC CGACTTCAGC GACGTCACGT CGCTGGCCAT CGACGAGACG TCGCGCGCTC GCGGCCACGA CTATGTGACC TTGGCTGCCG ACGCCCAGGC GCGACGCGTG ATCTTCGTGA CTGAGGGGCG GGACGCCAAA GCCGTGAAGG CGCTGGCTGA CGATCTGGCA GCTCATGGCT GCCCTCCCGA ACAGATCACC TCGGTGAGCA TCGACATGTC GCCCGCGTTC ATCAAGGGCG TAAGCGACCA GTTGCCCAAC GCGCAGATCA CCTTCGACAA GTTCCACCTT GTCGGACATG CGAACGCGGC CGTGGACAAA ACCAGGCGCA TCGAGCAGCG CACCGAGAAG TCCCTCAAGG GCATGCGCTG GACGCTGCTC AAGGATGTCT TCAGCCTCAA ACCGACGGCC GGCGCAGCAT TGCACGGGCT GATCACGGCA CCCAAGCTCA CACGGACGGC CCGCGCGTGG CTCTACAAGG AGCAGTTGCG CGAGGCGCTT GACCGAAAGC AGATCAACGT GATGCGCGAG ATGCTCAAGC ACTGGTGCGT CTGCGTGATG CGATCCAAGG TCGAGGCGAT GAAGGAAGTC GCAGCCCTCG TGCGCCGCCA CATGGACGGC ATCGTCGCCT GGGCGCAGAC CCGTCAGACC AACGGCTTCC TTGAAGCCAT CAATGGCCTG TTCCAGTCCG CCAAGCGCAG AGCTCGCGGC TTCAAACGCC TGTCCACCAT CAAGACCGTC ATCTTCCTGA TTGCCGGCAA GCTGGACTTC CAAACGTTCA ACCCGCATGC CCGGCAACCC ACTTGA
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Protein sequence | MTAKVFEAAL GIGAPWSVGA VEFDEATKVL TVPVDFKPGT RFKVSGQKGL HPVHDTVVKT YRHLNFFQHE CYLKVRTPRV KLGDGSVRLV EPDFAGRLSG FTLLFEALVL MLSQQMPFAA VARIVGESAY RCMQVCNRYV EMALEQADFS DVTSLAIDET SRARGHDYVT LAADAQARRV IFVTEGRDAK AVKALADDLA AHGCPPEQIT SVSIDMSPAF IKGVSDQLPN AQITFDKFHL VGHANAAVDK TRRIEQRTEK SLKGMRWTLL KDVFSLKPTA GAALHGLITA PKLTRTARAW LYKEQLREAL DRKQINVMRE MLKHWCVCVM RSKVEAMKEV AALVRRHMDG IVAWAQTRQT NGFLEAINGL FQSAKRRARG FKRLSTIKTV IFLIAGKLDF QTFNPHARQP T
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