Gene PXO_05626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_05626 
Symbol 
ID6305999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2530792 
End bp2531433 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID642639763 
ProductISXo8 transposase 
Protein accessionYP_001913623 
Protein GI188576694 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.122564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCCT CCTCATTCCG AACAAATAGT GTCTCGCATT TGTGGTGCGT TGTTCAGAGG 
TTCCCTAAGG GCGGTCGGCC CCGCACACGA CCGATGCGCG ATAGCGCACA TGCGCCGATC 
TCGGTACATG AAGTCGCGCA GCGCTTGCCC GCAAGGACGT ATCGGCAGGT CAGCTGGCGC 
CAGGGCAGCG ACGCAACGCT CAGTTCGCGG TTCGCGGCGG TGCGGGTTCG TGCCGCACAC 
AATCGCCAGG CACATGACGA GCAGTGGCTG CTGATCGAGT GGCCGCCGGG AGAGTCCGAG 
CCCCGCCACT ACTGGTTCTC GACGCGACCA AAGCAAACGC CGGTCAAGAC ACTGGTTGCC 
ACGGCACAAG GCCGATGGCG GATTGAACGC GATTATCAGG AGCTGAAGTC GGAGTTGGGC 
CTGCATCACT ATGAAGGGCG CAACTGGCGT GGTTTTCACC ATCACGCCAG TCTGTGCATC 
GCCGCATACG GGTTCTTGAT GCGCGAGCGC CTGCGCAGTA AAAAAAACTC CGTCGCATTC 
AAGATGCCTG CAGTATCCAA AAGCGTCCGC CCGCGCCGGT CTGGCCCCAA TGCAACGTCA 
CCATCCCAAC TCGATTGCCA CGCTGGCCTT CGGACTGGCT AG
 
Protein sequence
MDASSFRTNS VSHLWCVVQR FPKGGRPRTR PMRDSAHAPI SVHEVAQRLP ARTYRQVSWR 
QGSDATLSSR FAAVRVRAAH NRQAHDEQWL LIEWPPGESE PRHYWFSTRP KQTPVKTLVA 
TAQGRWRIER DYQELKSELG LHHYEGRNWR GFHHHASLCI AAYGFLMRER LRSKKNSVAF 
KMPAVSKSVR PRRSGPNATS PSQLDCHAGL RTG