Gene PXO_05578 details

Gene Information

• Locus tag: PXO_05578
• ID: 6305574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: -
• Start bp: 2107994
• End bp: 2108773
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642639342
• Product: IS1478 transposase
• Protein accession: YP_001913209
• Protein GI: 188576280

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.957263
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAAGGCT TCATCTGCGT TTTCGGTGTG CTGGAATTGC CAGTGTTCGT TACTCCACGT 
CCTGGTTTCT GGCAGTTTTC GCCCATGCGG ACACGCCGTC CTGCCGCCGA GCAGTTGCCT 
GCCGATGAGC TGTTTCGTTC GCGTCTGGAG AACCAGATCG ACGTGCGCCA TCCGCTGGTC 
CAGCTGAGCC ATCGGCTGCC GTGGAGTGCG TTGGAACAGG CGCTGTCGCC ACGGTTGCCT 
GCAACCACCA GCACAGGCGG TCGGCCCGCA TTGCCGGTGC GGTTGATCGC CGGGTTGCTC 
TACCTCAAGC ACGCCTACGA CCTGTCCGAC GAGGCGGTCT GCGAGCGCTG GCTGGAAAAT 
CCGTACTGGC AGTTCTTCAC CGGCGAGGTG GTGTTCCAGA CCTGCGTGCC GTGCGATCCC 
AGCTCCCTGA CCCGTTGGCG ACAGCGTCTG GGCGAAGCCG GGATGGAAGC GCTGTTGGCG 
CATACGATCA ACACCGCTCA CGCGATGAAG GCGGTGGACG CACGCGAGTT GTCGCGGGTG 
ATCGTGGATA CCACCGTGCA GGAAAAAGCG ATCGCCCATC CCACCGACAG CCGTTTGCTG 
GAGGTGGCGC GCAAGAAGCT GGTGCTGCTG GCCAAGCGAC ACGGCATCGT CTTGTGGCAG 
ACCTATGTGA GGCAAGGTCC GGGGTTGCGC CGCAAGGCCG GGCGCTATGC GCATGCGCGC 
CAGTTCAAGC GCATGCGCAA GGTACTGCGA CGCCAACGCA CGATCCTGGG ACGCGTATGA 

 

Protein sequence

MQGFICVFGV LELPVFVTPR PGFWQFSPMR TRRPAAEQLP ADELFRSRLE NQIDVRHPLV 
QLSHRLPWSA LEQALSPRLP ATTSTGGRPA LPVRLIAGLL YLKHAYDLSD EAVCERWLEN 
PYWQFFTGEV VFQTCVPCDP SSLTRWRQRL GEAGMEALLA HTINTAHAMK AVDARELSRV 
IVDTTVQEKA IAHPTDSRLL EVARKKLVLL AKRHGIVLWQ TYVRQGPGLR RKAGRYAHAR 
QFKRMRKVLR RQRTILGRV