Gene PXO_05576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_05576 
Symbol 
ID6305572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp2106082 
End bp2106630 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID642639340 
ProductISXo8 transposase 
Protein accessionYP_001913207 
Protein GI188576278 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.235017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGATA GCGCACATGC GCCGATCTCG GTACATGAAG TCGCGCAGAG CTTGCCCGCA 
AGGACGTATC GGCAGGTCAG CTGGCGCCAG GGCAGCGACG CCACGCTCAG TTCGCGGTTC 
GCGGCGGTGC GGGTTCGTGC CGCACACAAT CGCCAGGCAC ATGACGAGCA GTGGCTGCTG 
ATCGAGTGGC CGCCGGGAGA GTCCGAGCCC CGCCACTACT GGTTCTCGAC GCGACCAAAG 
CAAACGCCGG TCAAGACACT GGTTGCCACG GCACAAGGCC GATGGCGGAT TGAACGCGAT 
TATCAGGAGC TGAAGTCGGA GTTGGGCCTG CATCACTATG AAGGGCGCAA CTGGCGTGGT 
TTTCACCATC ACGCCAGTCT GTGCATCGCC GCATACGGGT TCTTGATGCG CGAGCGCCTG 
CGCAGTAAAA AAAACTCCGT CGCATTCAAG ATGCCTGCAG TATCCAAAAG CGTCCGCCCG 
CGCGGGTCTG GCCCCAATGC AACGTCACCA TCCCAACTCG ATTGCCACGC TGGCCTTCGG 
ACTGGCTAG
 
Protein sequence
MRDSAHAPIS VHEVAQSLPA RTYRQVSWRQ GSDATLSSRF AAVRVRAAHN RQAHDEQWLL 
IEWPPGESEP RHYWFSTRPK QTPVKTLVAT AQGRWRIERD YQELKSELGL HHYEGRNWRG 
FHHHASLCIA AYGFLMRERL RSKKNSVAFK MPAVSKSVRP RGSGPNATSP SQLDCHAGLR 
TG