Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_05536 |
Symbol | lspA |
ID | 6305052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1540510 |
End bp | 1541010 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638825 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001912702 |
Protein GI | 188575773 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.192233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAC GACCTAATCC CTCCGCACTG ATCTGGCTGC TGCTCTCCGC GCTAGTGATT GGCCTGGACC AGTGGAGCAA GGCTTGGGTG CTGTCCAGCC TGCCCGAGTA CACGTCGGTG CCGGTGATCG ACGGTTTCTG GAACTGGTAC CGCACTTACA ACACCGGCGC GGCCTTCAGC TTTTTGAGCG ATGCCGGCGG CTGGCAGCTG TGGTTCTTCA CTGCGTTGGC GATGGGCATC AGCGGCCTGC TGGCGTTCTG GCTCTCGCGC ACCGCGCGCG GGCACTGGCG CAGCGCGCTG CCGTATGCGC TGGTGATCGG CGGGGCGATC GGCAACGTGA TCGACCGGCT CATGCACGGC CACGTGGTGG ATTTCATCCA GTGGTACATC GGCAGCCATA CCTGGCCGTC CTTCAACATC GCCGATTCGG CGATCGTGGG TGGCGCCATC GGCATCGCGG TGTTTGGGTT GTTCGACAAA GCCGGCAAGC AGGCGTCGTG A
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Protein sequence | MSQRPNPSAL IWLLLSALVI GLDQWSKAWV LSSLPEYTSV PVIDGFWNWY RTYNTGAAFS FLSDAGGWQL WFFTALAMGI SGLLAFWLSR TARGHWRSAL PYALVIGGAI GNVIDRLMHG HVVDFIQWYI GSHTWPSFNI ADSAIVGGAI GIAVFGLFDK AGKQAS
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