| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_05496 |
|---|
| Symbol | |
|---|
| ID | 6304599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1090724 |
|---|
| End bp | 1091269 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642638374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001912256 |
|---|
| Protein GI | 188575327 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.827269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTC GGCGCGACGG TCGCGCAACC CGCTCCCGCG GCAGACAGCG GCTATCGGCT
TCCGTCCAAG GCGCTGCAGG CGATGGTGCC GACACCGCCA GCCAGGTCAC CGACTCGCCG
TGTCGCTTCA ATGCCATCAG CTACTGGGAC CGGCAGGCAT TCCTGGCGAT CGGCTACGTG
GTGCTCGACA CCTCGACCAT GCCGATCGTG GGCGAAGGCG ATGCCGAACC CAACGACACC
GACGTGCCGC AGCTGATCGC CGATGCGCAG GCCGCAGTGG ATGAGGTGGT GCGGCGTGGC
GTCACCGACC GCGCGCGCAT CGCCATCGGC GGGCATTCCT ATGGCGCCTT CATGACCGCC
AACCTGCTCG CGTACACACG TCTGTTCAAG GCCGGCATCG CGCGCAGCGG AATGTCGGCG
ATCCCGCGCA GGCTGCTGTG CCGGCCAAGC ATTGATCGTC GTCGCAAGCA ATGCGTTGCG
AACGCAACTC GGATCGTCGC ATCGCACATG GGAGCGCACC CGGGCGCGAT CGGGCTTTAT
CGGTGA
|
|---|
| Protein sequence | MGIRRDGRAT RSRGRQRLSA SVQGAAGDGA DTASQVTDSP CRFNAISYWD RQAFLAIGYV
VLDTSTMPIV GEGDAEPNDT DVPQLIADAQ AAVDEVVRRG VTDRARIAIG GHSYGAFMTA
NLLAYTRLFK AGIARSGMSA IPRRLLCRPS IDRRRKQCVA NATRIVASHM GAHPGAIGLY
R
|
|---|
| |