Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_05437 |
Symbol | recC |
ID | 6303830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 324568 |
End bp | 327981 |
Gene Length | 3414 bp |
Protein Length | 1137 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642637619 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001911504 |
Protein GI | 188574575 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.487403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATGCCA CTTCCGCGCC CGATTTCCGT CTTTATCCAT CCAATGCGCT GGATACCCTG GCCGCCCTGC TCGCGCAGGA GTTGCGCCGG CCGGTGCCGG GGCAGCCGTT GCTGCAGCCG GAGGTGGTGC TGATTCCGCA GGTGGCGATG CGGCGCTGGC TGCAGTCCAC ACTTGCGGCC GAGCACGGTG TTGCGGCCAA TCTGGAATTT CTCACGCCCG GCGAATTCGT CGCGCGTGCG CTGGAGCGCA ACCTCGGCGC GGCCGACGAC GATCTGGACA TGGCCACCAC GCAGTGGCGG TTGTATGCGG CCCTGCAATC GGACCTGGGC CGCGATGCGG CGTTGGCACC CCTGGCCGAC TATCTGGCCG ATGGCGATGC ACTCAAGCCG TGGGCGCTGG CCGGCGAGTT GGGCAGCGTG TTCGAAAAAT ATCAGGCATG GCGACGCGAT TGGTTGCTGC GCTGGGAAGG CGGCGCCGAT CCGGACGACC CGCAAGCCCG GTTGTGGCGC AGCATCGCCA CCGGCCGCCA ATACCGCGCA CGGCGTATCG GCCACTATCT GGATCGCCAT GCGCGCGCCG ATGGCCCGTT GCCGCAAGGG TTGCCGCCGC GTGTGTTTGC CTTCGCCATC TTGAATATCT CGCCGGACGT CTTGCGCGTG CTGGCCACGC AAGCGCGCGT GGGCACGTTG CATTTCTATC TGCCCACGCC CACGCAGGGG TACTGGGGCG ACCTGCAGAC GTTGAGGCAA CGCCGGCGCG AAGACGGCGC GGTGCAGTTG TTTGCCGAGC ACGTGCAGGA GAACCCGCTG CTGCAAGCCT GGGGCGCGGC CGGGCGCGAT TTCATGGCGC TGGTGGGCGA TTACGAAGTG GTACACCCAT TGGCCGAAAT TACGGCCTAT GCCGACCCGC TCGATTCCGG CCGTCGCACG TTGGCCGATG GCGGGCTGGG CGACAGCCTG CTGCGGCGGA TGCAGAGCGA CCTGTTCCAT CGCCGCGCGC CGGCGGTGCC TGCGTTGTTG CCTGCGGTGA ATCTGCACGA CCCCAGCCTG CAGGTGCACG CCTGCCACAC CCGGCTGCGC GAGCTGCAGG TACTGCACGA CCAACTGCGC GCGCTGCTCG ACGACCCGCG CTTCGACCCG CCGCTGCAGC CGCGCGAGAT TGCGGTGCTG TCGCCCAACA TCGACCCGTA CGTGCCGTAT CTGGACGCGG TGTTCGGCAG CCATGGCAAC GACGATGCGC TGCCCTACGC GCTGGCCGAT GCCAGTCCGT TGGCCAGCGA GCCGCTGGCC GAAGTGTTTT TGACCTTGCT CGGCTTGCCG ATCGCGCGTT TCGGTCTGCA TGAAATCCTC GACCTGCTGG CCAGTGCGCC GATCGCCGCC GCCGCCGGGC TGGACGAGGC TGGGCTGGAA CGCCTGCGCA GCTGGCTGCA CGCGGCGGGC GCGCGCTGGG GGCTGGATGC CGCGCATCGG CGGCAGCATC AGGCACCGGG CGACGATGCC TACACCTGGC GCTTTGCGCT GGACCGGCTG CTGCTTGGCC ATGCCAGCGG CGCCGACGAC GACATCGATG GCGTGGCGCC GTGGCCGCAA CTGGAAGGCA GCGCGTTGGC CGCGCTCGAT ACCTTGTTGC GGCTGCTGCG GGTGCTCGAA CGCCATCAGG CGGTGCTGGC CGACGCGATG ACGCCGGTGG AGTGGCGCGA GCGGTTGCTG GGACTGTTGG AAGCATTGAT TCCGACCACG CCCACCGCGC CGCGTGCGCA GCGCGCGCTG GATCGCTTGC GCACGATGAT CGACCAGTTC GCCCGCGATG CAGTGCGCGC CGACTACGCC GGCAAGGTGC CGGCCGAGGT GGTGCGTGCG CATTTCGCTG CGGTATTGGG CGAGTCGGAC ACGCGCGCGC CGCTGCTCAC CGGCGGCATC AGTTTCGGCC GCATGGTGCC GATGCGCTTG CTGCCGTTCC GCGTGATCTG CCTGCTTGGT ATGAACGATG GCGATTTCCC GCGCCGCGAC CCGGCCGCCG GGCTCAATCG CCTGACCGCT GAACTGGGTA CCGACCGTCG CCGGCATGGC GACCGTTCCA CGCGCGAGGA CGATCGCTTC CTGTTCCTGC AGTTGTTCGC CTCCGCGCAA GAGGTGTTTT ACCTCAGCTA TCTCGGTGCC GATGCGCGCG ATGGCAGCGT GCGCGAACCG TCGGTGCTGG TCAGCGAGTT GCTGTCAAGC GCCGCGCACT ACCACGCCGC CAGCAATGCG CTCGACACGC TGGTGGTGCG GCATCCGTTG CAGCCGTTCG CCGCCGCCGC ATTCGGTGCG CTGGGCGATG AGAGCGATGC CGGTGCCGAC CCGCGCCGTT TCAGTTATCG CCGGCAATGG CGCCCGGCGG TGGACAGCCT GGTCGGTCAG CGGCAGCCGC TGGCGCCGTG GGTGGCCGGT GCATTGCCGG CCGACGACAC TGCGTTGCAG GCCAGCGTGT CCATCGACGA ACTGCGCCGG CTGTTTGCCG ACCCGGCCGG GCAGTTTCTG CGCCATCGCC TGGGCATGCG CCTGCCCGAT CCGGGCGGCG AAGACAGCGA TCTGGAACCG TTGCTCGCAC CCACGCGCGG GCTGGACCAA TACGGCTTGC AGCAGCAGGT CTGCGAAGCC GCATTGGCCG GCGACACCGA AGGCCTGTAC GAGCGCCTGC GCGCGCGCGC GCTGCTGCCA TCCGGCCCGC TGGGGCGGCG CCAGCTCGAC GAGCGCGTGG CGCAATTGCG CCCGTATGCC GATGCGTTTC GGCAGTGGCG TGGCCAGTCG CCGGCCGAGT CACGCCGGCT GCAGGTGCAG ATCGGCGATA TCGAACTTCA CGCTCGTGTG CCGGGCTGGT ATGCAAGCGG CGTCGGGCGC GTGCAGGTCG GCGCCCTCAG CGGCCGCAGC GCCATTCGCC ATGGGCTGGA ATGGTTGTTG CTGCGCGCCG CCGGCGAACA CGCGCCGTAC GTGCGTTTCT TCGAACACGA CGACGGCCTG GGCCCGCATC CGATCGATGC GCAGCCGCTG TCGCAGCCGC AGGCCCAGAC CGCATTGGCC GAGCTGCTGC AGCTGTATCG CCATGGCTTG CAAACGCCGC TGGCGTTCGC GCCTTACAGC AGTTGGAAGT ACCACCAGGC TGCGCGCGGC GACGATCTGG ACAAGGCCAT CAAGGACGCG GCCGGGCAGT GGCAATCGGG CTTCGGCTGG AGCGAATCGC ACAGCCCGGA ACTGCGCTTG GTCAACCGCG GCCGCGACCC GTTTGCCGAT GCGCAACGCT TCGCCGATTT CGCCACTACC AGCCATCGTG TGTACGCATT GCTCGAACAA GGCGATAGCG GCGCGCCGCT CGATGCCGAG CGCTTGATCG ACAGCTGGCG GCATTGGCAC GGCGCGCAGG AAGATGCCGA ATGA
|
Protein sequence | MHATSAPDFR LYPSNALDTL AALLAQELRR PVPGQPLLQP EVVLIPQVAM RRWLQSTLAA EHGVAANLEF LTPGEFVARA LERNLGAADD DLDMATTQWR LYAALQSDLG RDAALAPLAD YLADGDALKP WALAGELGSV FEKYQAWRRD WLLRWEGGAD PDDPQARLWR SIATGRQYRA RRIGHYLDRH ARADGPLPQG LPPRVFAFAI LNISPDVLRV LATQARVGTL HFYLPTPTQG YWGDLQTLRQ RRREDGAVQL FAEHVQENPL LQAWGAAGRD FMALVGDYEV VHPLAEITAY ADPLDSGRRT LADGGLGDSL LRRMQSDLFH RRAPAVPALL PAVNLHDPSL QVHACHTRLR ELQVLHDQLR ALLDDPRFDP PLQPREIAVL SPNIDPYVPY LDAVFGSHGN DDALPYALAD ASPLASEPLA EVFLTLLGLP IARFGLHEIL DLLASAPIAA AAGLDEAGLE RLRSWLHAAG ARWGLDAAHR RQHQAPGDDA YTWRFALDRL LLGHASGADD DIDGVAPWPQ LEGSALAALD TLLRLLRVLE RHQAVLADAM TPVEWRERLL GLLEALIPTT PTAPRAQRAL DRLRTMIDQF ARDAVRADYA GKVPAEVVRA HFAAVLGESD TRAPLLTGGI SFGRMVPMRL LPFRVICLLG MNDGDFPRRD PAAGLNRLTA ELGTDRRRHG DRSTREDDRF LFLQLFASAQ EVFYLSYLGA DARDGSVREP SVLVSELLSS AAHYHAASNA LDTLVVRHPL QPFAAAAFGA LGDESDAGAD PRRFSYRRQW RPAVDSLVGQ RQPLAPWVAG ALPADDTALQ ASVSIDELRR LFADPAGQFL RHRLGMRLPD PGGEDSDLEP LLAPTRGLDQ YGLQQQVCEA ALAGDTEGLY ERLRARALLP SGPLGRRQLD ERVAQLRPYA DAFRQWRGQS PAESRRLQVQ IGDIELHARV PGWYASGVGR VQVGALSGRS AIRHGLEWLL LRAAGEHAPY VRFFEHDDGL GPHPIDAQPL SQPQAQTALA ELLQLYRHGL QTPLAFAPYS SWKYHQAARG DDLDKAIKDA AGQWQSGFGW SESHSPELRL VNRGRDPFAD AQRFADFATT SHRVYALLEQ GDSGAPLDAE RLIDSWRHWH GAQEDAE
|
| |