Gene PXO_05437 details

Gene Information

• Locus tag: PXO_05437
• Symbol: recC
• ID: 6303830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 324568
• End bp: 327981
• Gene Length: 3414 bp
• Protein Length: 1137 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 642637619
• Product: exodeoxyribonuclease V, gamma subunit
• Protein accession: YP_001911504
• Protein GI: 188574575
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1330] Exonuclease V gamma subunit
• TIGRFAM ID: [TIGR01450] exodeoxyribonuclease V, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.487403
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGCCA CTTCCGCGCC CGATTTCCGT CTTTATCCAT CCAATGCGCT GGATACCCTG 
GCCGCCCTGC TCGCGCAGGA GTTGCGCCGG CCGGTGCCGG GGCAGCCGTT GCTGCAGCCG 
GAGGTGGTGC TGATTCCGCA GGTGGCGATG CGGCGCTGGC TGCAGTCCAC ACTTGCGGCC 
GAGCACGGTG TTGCGGCCAA TCTGGAATTT CTCACGCCCG GCGAATTCGT CGCGCGTGCG 
CTGGAGCGCA ACCTCGGCGC GGCCGACGAC GATCTGGACA TGGCCACCAC GCAGTGGCGG 
TTGTATGCGG CCCTGCAATC GGACCTGGGC CGCGATGCGG CGTTGGCACC CCTGGCCGAC 
TATCTGGCCG ATGGCGATGC ACTCAAGCCG TGGGCGCTGG CCGGCGAGTT GGGCAGCGTG 
TTCGAAAAAT ATCAGGCATG GCGACGCGAT TGGTTGCTGC GCTGGGAAGG CGGCGCCGAT 
CCGGACGACC CGCAAGCCCG GTTGTGGCGC AGCATCGCCA CCGGCCGCCA ATACCGCGCA 
CGGCGTATCG GCCACTATCT GGATCGCCAT GCGCGCGCCG ATGGCCCGTT GCCGCAAGGG 
TTGCCGCCGC GTGTGTTTGC CTTCGCCATC TTGAATATCT CGCCGGACGT CTTGCGCGTG 
CTGGCCACGC AAGCGCGCGT GGGCACGTTG CATTTCTATC TGCCCACGCC CACGCAGGGG 
TACTGGGGCG ACCTGCAGAC GTTGAGGCAA CGCCGGCGCG AAGACGGCGC GGTGCAGTTG 
TTTGCCGAGC ACGTGCAGGA GAACCCGCTG CTGCAAGCCT GGGGCGCGGC CGGGCGCGAT 
TTCATGGCGC TGGTGGGCGA TTACGAAGTG GTACACCCAT TGGCCGAAAT TACGGCCTAT 
GCCGACCCGC TCGATTCCGG CCGTCGCACG TTGGCCGATG GCGGGCTGGG CGACAGCCTG 
CTGCGGCGGA TGCAGAGCGA CCTGTTCCAT CGCCGCGCGC CGGCGGTGCC TGCGTTGTTG 
CCTGCGGTGA ATCTGCACGA CCCCAGCCTG CAGGTGCACG CCTGCCACAC CCGGCTGCGC 
GAGCTGCAGG TACTGCACGA CCAACTGCGC GCGCTGCTCG ACGACCCGCG CTTCGACCCG 
CCGCTGCAGC CGCGCGAGAT TGCGGTGCTG TCGCCCAACA TCGACCCGTA CGTGCCGTAT 
CTGGACGCGG TGTTCGGCAG CCATGGCAAC GACGATGCGC TGCCCTACGC GCTGGCCGAT 
GCCAGTCCGT TGGCCAGCGA GCCGCTGGCC GAAGTGTTTT TGACCTTGCT CGGCTTGCCG 
ATCGCGCGTT TCGGTCTGCA TGAAATCCTC GACCTGCTGG CCAGTGCGCC GATCGCCGCC 
GCCGCCGGGC TGGACGAGGC TGGGCTGGAA CGCCTGCGCA GCTGGCTGCA CGCGGCGGGC 
GCGCGCTGGG GGCTGGATGC CGCGCATCGG CGGCAGCATC AGGCACCGGG CGACGATGCC 
TACACCTGGC GCTTTGCGCT GGACCGGCTG CTGCTTGGCC ATGCCAGCGG CGCCGACGAC 
GACATCGATG GCGTGGCGCC GTGGCCGCAA CTGGAAGGCA GCGCGTTGGC CGCGCTCGAT 
ACCTTGTTGC GGCTGCTGCG GGTGCTCGAA CGCCATCAGG CGGTGCTGGC CGACGCGATG 
ACGCCGGTGG AGTGGCGCGA GCGGTTGCTG GGACTGTTGG AAGCATTGAT TCCGACCACG 
CCCACCGCGC CGCGTGCGCA GCGCGCGCTG GATCGCTTGC GCACGATGAT CGACCAGTTC 
GCCCGCGATG CAGTGCGCGC CGACTACGCC GGCAAGGTGC CGGCCGAGGT GGTGCGTGCG 
CATTTCGCTG CGGTATTGGG CGAGTCGGAC ACGCGCGCGC CGCTGCTCAC CGGCGGCATC 
AGTTTCGGCC GCATGGTGCC GATGCGCTTG CTGCCGTTCC GCGTGATCTG CCTGCTTGGT 
ATGAACGATG GCGATTTCCC GCGCCGCGAC CCGGCCGCCG GGCTCAATCG CCTGACCGCT 
GAACTGGGTA CCGACCGTCG CCGGCATGGC GACCGTTCCA CGCGCGAGGA CGATCGCTTC 
CTGTTCCTGC AGTTGTTCGC CTCCGCGCAA GAGGTGTTTT ACCTCAGCTA TCTCGGTGCC 
GATGCGCGCG ATGGCAGCGT GCGCGAACCG TCGGTGCTGG TCAGCGAGTT GCTGTCAAGC 
GCCGCGCACT ACCACGCCGC CAGCAATGCG CTCGACACGC TGGTGGTGCG GCATCCGTTG 
CAGCCGTTCG CCGCCGCCGC ATTCGGTGCG CTGGGCGATG AGAGCGATGC CGGTGCCGAC 
CCGCGCCGTT TCAGTTATCG CCGGCAATGG CGCCCGGCGG TGGACAGCCT GGTCGGTCAG 
CGGCAGCCGC TGGCGCCGTG GGTGGCCGGT GCATTGCCGG CCGACGACAC TGCGTTGCAG 
GCCAGCGTGT CCATCGACGA ACTGCGCCGG CTGTTTGCCG ACCCGGCCGG GCAGTTTCTG 
CGCCATCGCC TGGGCATGCG CCTGCCCGAT CCGGGCGGCG AAGACAGCGA TCTGGAACCG 
TTGCTCGCAC CCACGCGCGG GCTGGACCAA TACGGCTTGC AGCAGCAGGT CTGCGAAGCC 
GCATTGGCCG GCGACACCGA AGGCCTGTAC GAGCGCCTGC GCGCGCGCGC GCTGCTGCCA 
TCCGGCCCGC TGGGGCGGCG CCAGCTCGAC GAGCGCGTGG CGCAATTGCG CCCGTATGCC 
GATGCGTTTC GGCAGTGGCG TGGCCAGTCG CCGGCCGAGT CACGCCGGCT GCAGGTGCAG 
ATCGGCGATA TCGAACTTCA CGCTCGTGTG CCGGGCTGGT ATGCAAGCGG CGTCGGGCGC 
GTGCAGGTCG GCGCCCTCAG CGGCCGCAGC GCCATTCGCC ATGGGCTGGA ATGGTTGTTG 
CTGCGCGCCG CCGGCGAACA CGCGCCGTAC GTGCGTTTCT TCGAACACGA CGACGGCCTG 
GGCCCGCATC CGATCGATGC GCAGCCGCTG TCGCAGCCGC AGGCCCAGAC CGCATTGGCC 
GAGCTGCTGC AGCTGTATCG CCATGGCTTG CAAACGCCGC TGGCGTTCGC GCCTTACAGC 
AGTTGGAAGT ACCACCAGGC TGCGCGCGGC GACGATCTGG ACAAGGCCAT CAAGGACGCG 
GCCGGGCAGT GGCAATCGGG CTTCGGCTGG AGCGAATCGC ACAGCCCGGA ACTGCGCTTG 
GTCAACCGCG GCCGCGACCC GTTTGCCGAT GCGCAACGCT TCGCCGATTT CGCCACTACC 
AGCCATCGTG TGTACGCATT GCTCGAACAA GGCGATAGCG GCGCGCCGCT CGATGCCGAG 
CGCTTGATCG ACAGCTGGCG GCATTGGCAC GGCGCGCAGG AAGATGCCGA ATGA 

 

Protein sequence

MHATSAPDFR LYPSNALDTL AALLAQELRR PVPGQPLLQP EVVLIPQVAM RRWLQSTLAA 
EHGVAANLEF LTPGEFVARA LERNLGAADD DLDMATTQWR LYAALQSDLG RDAALAPLAD 
YLADGDALKP WALAGELGSV FEKYQAWRRD WLLRWEGGAD PDDPQARLWR SIATGRQYRA 
RRIGHYLDRH ARADGPLPQG LPPRVFAFAI LNISPDVLRV LATQARVGTL HFYLPTPTQG 
YWGDLQTLRQ RRREDGAVQL FAEHVQENPL LQAWGAAGRD FMALVGDYEV VHPLAEITAY 
ADPLDSGRRT LADGGLGDSL LRRMQSDLFH RRAPAVPALL PAVNLHDPSL QVHACHTRLR 
ELQVLHDQLR ALLDDPRFDP PLQPREIAVL SPNIDPYVPY LDAVFGSHGN DDALPYALAD 
ASPLASEPLA EVFLTLLGLP IARFGLHEIL DLLASAPIAA AAGLDEAGLE RLRSWLHAAG 
ARWGLDAAHR RQHQAPGDDA YTWRFALDRL LLGHASGADD DIDGVAPWPQ LEGSALAALD 
TLLRLLRVLE RHQAVLADAM TPVEWRERLL GLLEALIPTT PTAPRAQRAL DRLRTMIDQF 
ARDAVRADYA GKVPAEVVRA HFAAVLGESD TRAPLLTGGI SFGRMVPMRL LPFRVICLLG 
MNDGDFPRRD PAAGLNRLTA ELGTDRRRHG DRSTREDDRF LFLQLFASAQ EVFYLSYLGA 
DARDGSVREP SVLVSELLSS AAHYHAASNA LDTLVVRHPL QPFAAAAFGA LGDESDAGAD 
PRRFSYRRQW RPAVDSLVGQ RQPLAPWVAG ALPADDTALQ ASVSIDELRR LFADPAGQFL 
RHRLGMRLPD PGGEDSDLEP LLAPTRGLDQ YGLQQQVCEA ALAGDTEGLY ERLRARALLP 
SGPLGRRQLD ERVAQLRPYA DAFRQWRGQS PAESRRLQVQ IGDIELHARV PGWYASGVGR 
VQVGALSGRS AIRHGLEWLL LRAAGEHAPY VRFFEHDDGL GPHPIDAQPL SQPQAQTALA 
ELLQLYRHGL QTPLAFAPYS SWKYHQAARG DDLDKAIKDA AGQWQSGFGW SESHSPELRL 
VNRGRDPFAD AQRFADFATT SHRVYALLEQ GDSGAPLDAE RLIDSWRHWH GAQEDAE