| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04888 |
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| Symbol | |
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| ID | 6305002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1487430 |
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| End bp | 1488293 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638775 |
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| Product | type IV prepilin peptidase |
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| Protein accession | YP_001912652 |
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| Protein GI | 188575723 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.528237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTTC TCGACCAGCA TCCCGGTCTC GGCTTTCCCG CCGCGGCCGG ACTGGGACTG
CTGATCGGCA GCTTCCTGAA CGTGGTGATC CTGCGCTTGC CCAGGCGTAT GGAGTGGCAA
TGGCGACGCG ATGCACGCGA GATCCTGGAG CTGCCGGACA TCTATGAGCC GCCGCCGCCG
GGGATCGTGG TAGAGCCTTC GCATGACCCG GTCACTGGCG ACAAGCTCAA ATGGTGGGAG
AACATCCCGC TCTTCAGTTG GCTGATGTTG CGCGGCAAGT CGCGCTACAG CGGCAAGCCG
ATCTCCATCC AATATCCATT AGTCGAGTTG CTGACGTCGA TCCTGTGCGT GGCAAGCGTC
TGGCGCTTCG GCTTTGGCTG GCAGGGCTTC GGCGCGATCG TGCTGAGCTG TTTCCTGGTG
GCGATGTCGG GCATCGACCT GCGTCACAAG CTGCTGCCCG ACCAATTGAC TCTGCCGCTG
ATGTGGTTGG GCCTGGTCGG CTCGATGGAC AACCTCTACA TGCCAGCCAA GCCCGCCCTA
TTGGGCGCGA CGGTTGGCTA TGTGTCGCTA TGGACGGTGT GGTGGCTGTT CAAGCAGCTC
ACCGGCAAGG AAGGTATGGG CCATGGCGAT TTCAAACTAT TGGCCGCGCT TGGCGCGTGG
TGTGGGTTGA AAGGCATCCT GCCCATCATC CTGATCTCCT CGCTGGTTGG TGCCATCCTC
GGCTCGATCT GGCTAGTCGC CAAGGGCCGC GACCGCGCCA CCCCCATCCC GTTCGGCCCC
TACCTGGCCA TCGCCGGCTG GGTGGTGTTC TTCTGGGGCA ACGACCTGGT GGACGGCTAC
CTGCACTTCG CAGGTCTGCG TTGA
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| Protein sequence | MAFLDQHPGL GFPAAAGLGL LIGSFLNVVI LRLPRRMEWQ WRRDAREILE LPDIYEPPPP
GIVVEPSHDP VTGDKLKWWE NIPLFSWLML RGKSRYSGKP ISIQYPLVEL LTSILCVASV
WRFGFGWQGF GAIVLSCFLV AMSGIDLRHK LLPDQLTLPL MWLGLVGSMD NLYMPAKPAL
LGATVGYVSL WTVWWLFKQL TGKEGMGHGD FKLLAALGAW CGLKGILPII LISSLVGAIL
GSIWLVAKGR DRATPIPFGP YLAIAGWVVF FWGNDLVDGY LHFAGLR
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