| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04883 |
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| Symbol | |
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| ID | 6305007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1492715 |
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| End bp | 1494199 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642638780 |
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| Product | putative integral membrane protein |
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| Protein accession | YP_001912657 |
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| Protein GI | 188575728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGGG GTGTTGCTTT CCTTGTGGGC GCGGCGAGTC TGGTGCAGGA GGTGCTGTGG
GTGCGGCTTG CGGGATTCGC GACCGGTGGT CTGCCAGAGA CATTCGCGAC GATCCTTACG
TTGTATCTTC TGGGTATCGC GGTAGGAGCG CAGCTGGGGC GTCGTCTGTG CGTTGGCCGG
GTCCTGGACA TCAGGCGTCG CGCGTCGCTC GTGCTGTTGC TGTCCGCGCT GGTTGATATC
GCCGCCCCTT TCCTGTTTTC TTGGGGGATC GGTTTTCTTC CCGTGACTGT CGCAATGCTG
CCTCTGGTGA TCGCAACCGC TGCGCTGAAG AGCGCATTGT TCCCGGTGGT GCACCATCTG
GGCAGCAATG ATGCAGTGGC ATGGAAAGGC GGGTCGTTCT CCAAGGTCTA CTTCGCCAAT
GTGGCGGGAT GCACCCTCGG TCCACTGATC GTCACGCTCT GGCTGATGGA CGTGATGGTG
ATGGAGCAGC TTTTCGTCGG TGTCGCCACT GTCACCGCGG TGGCAGGGAT GTGGCTGGCC
GGCCTTCGCC TACTGGCGGT GCCTGCAGTG GTGGTCGCGA TTGCGGCACT TGTACTCCAG
CCTGCATTGC CAGCGCTTGC CAGCCGCATC GTGATGGCGA CGGGGGGGGC TCAGGCCGAC
TGGCTGCTGG AGCGCAAAGA AGGAATCATC CATACGATCG CCGACCCACA GGGAGACATC
GTATTTGGCG GCAATGTGTA CGACGGGCGC ATCAACGTCG ATCTGCGATC GAACAGCAAC
AAGATCGATC GTGTCTATGC CGCCATGGCG GCTGTGCCGA ATCCCAAGCG TGTGCTCGTG
ATCGGTCTTG GCGGAGGCAG CTGGACGCGT GTGATTGCAT CATTCCCGAC TGTGGACCGC
GTGGACGTTG TCGAGACCAA TCCGGGCTAT CTCGAGTTGA TCGCCGGTCA CCCACAGGTC
GCACCGATCC TGCAGGATCC GCGTGTCCAC ATCCATATCG ACGACGGTCG TCGCTGGTTG
AGGGCACAAG GGGGGGCGCG CTACGATGCG ATCGTGGTAA ACAGTACGTT CCACTGGCGT
TCTGGTGCAA CGACGCTGCT CTCGCAGGAG TTCTTTCGCC TGGTTGGCGC GCATCTGTCC
GATTCAGGCG TCGCGTTGGT GAATGCCACC GGGTCTCCAG AGGTCCTCAA GACGGCAGCT
TCGGAGTTTC CGCAGGCCTA TCTGTTTGGC AACAGTGTCA TCATGTCACG ACGCGACTTC
CGCGATACGC TTCGCGCTGG TGGCGAAGCC ATTTACGCGA CCCGAATGCA TGGGCGGCCG
GTCTTTGATC CGGCCAATGC GTCTGATGCG GCCGCTGTGC GGAAGGTCAC CGCGGCCGAT
CTCGTAGGTG TTGATGTGGT GGAAGAGCGG GCCGGGCGAC CAGTCGAGGT CAATACTGAC
CTGAGGATGT TGACCGAGTA TAAATATGGG GCATCGTCCC GATGA
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| Protein sequence | MPRGVAFLVG AASLVQEVLW VRLAGFATGG LPETFATILT LYLLGIAVGA QLGRRLCVGR
VLDIRRRASL VLLLSALVDI AAPFLFSWGI GFLPVTVAML PLVIATAALK SALFPVVHHL
GSNDAVAWKG GSFSKVYFAN VAGCTLGPLI VTLWLMDVMV MEQLFVGVAT VTAVAGMWLA
GLRLLAVPAV VVAIAALVLQ PALPALASRI VMATGGAQAD WLLERKEGII HTIADPQGDI
VFGGNVYDGR INVDLRSNSN KIDRVYAAMA AVPNPKRVLV IGLGGGSWTR VIASFPTVDR
VDVVETNPGY LELIAGHPQV APILQDPRVH IHIDDGRRWL RAQGGARYDA IVVNSTFHWR
SGATTLLSQE FFRLVGAHLS DSGVALVNAT GSPEVLKTAA SEFPQAYLFG NSVIMSRRDF
RDTLRAGGEA IYATRMHGRP VFDPANASDA AAVRKVTAAD LVGVDVVEER AGRPVEVNTD
LRMLTEYKYG ASSR
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