| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04873 |
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| Symbol | |
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| ID | 6305020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1506020 |
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| End bp | 1507021 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642638793 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_001912670 |
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| Protein GI | 188575741 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCATGT CCGACCCATC TGCCGACCCC CTCGACCCGT CCATCCGCCA GGCGATCGTG
CCCGACAATG CCGCCGGACG CCGTTTCGAC GCGGTGCTGG CCGAGTTGTT CCCCGAATTC
TCGCGCTCGC GACTGTCGGA GTGGATCAAG TCCGGCGACG CCCTGCTGGA CGGCGCCATG
GCGCGCCCGC GCGACACCTT GCGCGGCGGC GAGAGCGTGC AGGTGCAAGT GGTGCTGGAG
ACCCAGACCC ATGCCGCGCC GCAGGACATC GCGCTGAGCG TGCTGTACGA AGACGAGCAG
GTGTTGGTGA TCGACAAGCC GGCCGGCCTG GTGGTGCATC CAGGCGCCGG CAATCCGGAC
GGCACCCTGG TCAATGCGCT GCTGTTTCGC GACCCTGCGC TGGCATCGGT GCCGCGCGCT
GGCGTGGTGC ATCGCCTGGA CAAGGACACC AGTGGCGTGA TGGTGTTGGC GCGCACCGTA
CAGGCGCAAA CCGCGCTGGT GGAGCAGCTG TCCGCGCGCG ATGTGCATCG CCAGTACCTG
GCGGTGGTGG TGGGGGCGCT GGTCTCCGGC GGCACTGCCA ATGCCCCAAT CGACCGTCAC
CCGCGCGACC GCCTGAAGAT GGCGGTGCGC GACGACGGTC GCGATGCAGT CACGCATTAC
CGCCTGCGCG AGCGCTTCCG CGCCCACACC GCGCTGGAGT GCCGCCTGGA AACCGGGCGT
ACCCATCAGA TCCGCGTGCA CATGGCGCAC CTGAAATCGC CGATCGTCGG CGACCCGCTG
TACGGCGGCG CGCTCAAGCT GCCCAAGGGC GCCACCGACG AGCTGGTGCA CGAACTGCGC
ACCTTCAAGC GCCAGGCGCT GCATGCCGAA ACGCTGCAAT TCCTGCATCC GGTCAGCGGC
GAGCCGGTCC GCGCCAGCGC GCCGGTGCCG GCCGATCTGC AGCGCCTGAT GACCGCGCTG
CGCGAAGACA GCGCACGCGC CGCCGAGTTG GCACGCCACT GA
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| Protein sequence | MSMSDPSADP LDPSIRQAIV PDNAAGRRFD AVLAELFPEF SRSRLSEWIK SGDALLDGAM
ARPRDTLRGG ESVQVQVVLE TQTHAAPQDI ALSVLYEDEQ VLVIDKPAGL VVHPGAGNPD
GTLVNALLFR DPALASVPRA GVVHRLDKDT SGVMVLARTV QAQTALVEQL SARDVHRQYL
AVVVGALVSG GTANAPIDRH PRDRLKMAVR DDGRDAVTHY RLRERFRAHT ALECRLETGR
THQIRVHMAH LKSPIVGDPL YGGALKLPKG ATDELVHELR TFKRQALHAE TLQFLHPVSG
EPVRASAPVP ADLQRLMTAL REDSARAAEL ARH
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