Gene PXO_04853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04853 
Symbol 
ID6304998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1482443 
End bp1483411 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content62% 
IMG OID642638771 
ProductIS1112 transposase 
Protein accessionYP_001912648 
Protein GI188575719 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0362678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTTGC CTATGTCCTC CAGCCGCCTG GACCTGTCGG AACGATACTG TCTCCATGCG 
CTACATGAAA CCGGGATGTC GATGCGCGCC ATCGCCGATG CATTGGAGCG TGCGCCCAGC
ACGATCAGCC GCGAACTGCG CCGTAATCAG CACGCTGCGC GGTACCGGCC CGATCACGCG
CAGCGCATCA GCGAGTATCG GCGCACACAG GCCAGCCGGC GTCCACGCAT CGACGCTGAG
CGTATCGGCC AGATCGAGGA CCTGCTGAGG GAGGACTTCA GTCCCGAACA GATTGCCGGT
CGCACCGGCT TGGCCAGTCA CGAATGGATC TATCGGCACA TCGACGCCGA TCAGAAGCGC
GGTGGTCAGT TGTTCATGCA TCTACGCAAA CGCCGCCGCA AGCGCCGTCG GCGTGGCATG
CGCGATGGCC GCGGGCAGCT GACGCATCGG CGCAGCTGGA CACAGCGACC CAGTGTGGTT
GAGCAGCGCA GCCGCATCGG CGACTGGGAG CTGGATACCA TCAGGGCCTC GCACGGAAAG
GGTGTGGTGG TCAGCATGAC CGAACGCCGC AGTCGTCTGC ATCTGCTGGC TTACTCCCCC
GACGGCACCG CCGAGAACGT GCGCAACGCC ATTGTCCAGC GACTGGGCGG CCTGCACCAT
ACAGTTCACA CGCTCACCGC CGACAACGGC AAGGAGTTCG CCGATCATCG GCTCATTGCC
GCCTGCTTGC AGAGCGATTT CTATTTCGCA GATCCGTACT GCGCATGGCA GCGCGGCAGC
AACGAGAATG CCAACGGGTT GACACGCCAA TACTTGCCAC GACAGACCGA TTTCAGCACC
ATCACCAATG CGCACCTGCG ATGGATCGAG CAGCGGCTCT ACAATCGTCC GCGCAAGATA
CTTGGATTCA AAACGCCCCT CGAAGTCTTC TCCGAGGAGG TCCTCAACAG CGTTGCGAAT
CAGAGTTGA
 
Protein sequence
MELPMSSSRL DLSERYCLHA LHETGMSMRA IADALERAPS TISRELRRNQ HAARYRPDHA 
QRISEYRRTQ ASRRPRIDAE RIGQIEDLLR EDFSPEQIAG RTGLASHEWI YRHIDADQKR
GGQLFMHLRK RRRKRRRRGM RDGRGQLTHR RSWTQRPSVV EQRSRIGDWE LDTIRASHGK
GVVVSMTERR SRLHLLAYSP DGTAENVRNA IVQRLGGLHH TVHTLTADNG KEFADHRLIA
ACLQSDFYFA DPYCAWQRGS NENANGLTRQ YLPRQTDFST ITNAHLRWIE QRLYNRPRKI
LGFKTPLEVF SEEVLNSVAN QS