| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04835 |
|---|
| Symbol | |
|---|
| ID | 6304979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1458723 |
|---|
| End bp | 1459916 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642638752 |
|---|
| Product | two-component system sensor protein |
|---|
| Protein accession | YP_001912629 |
|---|
| Protein GI | 188575700 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGC TGCGGCGATT TCATGCGTGG CGCAACCAGG CCCCGCTGTG GTGGTGGGTG
GGGCTGCGCA TGAGCGCGCT GGCGGTCCTG ACCATGATGG TCATCGCCTT CGGCATGTGG
TGCTATTTCA ATCTTCGCTA CAGCCTGATT CTGAGCAACG TGCCCGCCGA GCCGCGTGCC
GAGATCTCCC AGCTGATCGC GCAGCCCAGG GCCAACCAGG CCCGCCTGTG GGAGCTGTTC
CAGCGCTATT ACGACATTGA AAATTTCCTG CCCGGGCTGG CCAATCCGGA CTGGTGGATG
CTGGGCGCCA TGATGACCAT CTCGGTCCCG GTCATCCTGT TCTGCGGCCT GCTCGCGTCG
CGGCCGCTGT CGCGGCAATT TTCGCAGGTG GCTTTCGCGG CGCATCGGGT CAGCGATGGC
GATTTCGGCG CACGCGCACA CGTGGTGCGC GGCGCACCGG ACGAGCTCAC CGCCCTGGCC
GACGACTTCA ATACGATGAG CGGCAGGCTG CAGCAGTACG AGCGCGAATT ACGCGACTCC
AGCGCGATGT TGGCGCATGA ATTGCGCACC CCGCTCAATG CCGCGATGGG ACGCGTGCAA
GGCATGCTGG ATGAGGTCTT CCCGCGCGAA CCCGAGCAAC TGCGGCTGGT GCATCGTCAG
CTGGAGCAGA TCAATCGCCT GATCGGGGAT TTGCACCTGG TGTCGCTGGC GCGTGCCGGC
CAATTGGTGC TGGAGCCGGA AAGTGTCGAG CTGCGGGAGC TCGTCGCCGA ACGCATCGAG
TGGGCGGGGC CGGCGCTGCG CCAGGCGCAG ATGGCGATCC ATTACCCCAT GCATCCCCCG
CTGCGCTTGC GTGCCGACCG GCACCGGCTG GGCCAGGTGT TGTCGATCCT CATCGATAAC
GCGTTGCGCT ACGCCGCAGC CGGCAAGCTG CTGGAAATCG AGGTGCACCG CGAGGGCACC
AGCGTGCAGC TCACTTTGGG CGACCGTGGG CCGGGCGTAG AGCCTGCGCA ATTACCGCAT
CTGTTGGACC GCTTCTGGCG CGCCGACAGC TCGCGCGCAC GGCATTCCGG CGGCAGCGGC
CTGGGCCTGG CGATCGCCTC GGCCATCTGC CAGGCGCACG ATGGCCGGCT GGTCGTCAGC
AACCGCCCCG GCGGTGGCCT GCTGGCCGGC GTGCGGTTAC CGCTGGGGCG TTGA
|
|---|
| Protein sequence | MKALRRFHAW RNQAPLWWWV GLRMSALAVL TMMVIAFGMW CYFNLRYSLI LSNVPAEPRA
EISQLIAQPR ANQARLWELF QRYYDIENFL PGLANPDWWM LGAMMTISVP VILFCGLLAS
RPLSRQFSQV AFAAHRVSDG DFGARAHVVR GAPDELTALA DDFNTMSGRL QQYERELRDS
SAMLAHELRT PLNAAMGRVQ GMLDEVFPRE PEQLRLVHRQ LEQINRLIGD LHLVSLARAG
QLVLEPESVE LRELVAERIE WAGPALRQAQ MAIHYPMHPP LRLRADRHRL GQVLSILIDN
ALRYAAAGKL LEIEVHREGT SVQLTLGDRG PGVEPAQLPH LLDRFWRADS SRARHSGGSG
LGLAIASAIC QAHDGRLVVS NRPGGGLLAG VRLPLGR
|
|---|
| |