Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04825 |
Symbol | |
ID | 6304968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1446838 |
End bp | 1448682 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642638741 |
Product | ATP-dependent RNA helicase |
Protein accession | YP_001912618 |
Protein GI | 188575689 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGCCG TTGCCAATGT CGGCTACGAG TCGCCGTCGC CGATCCAGGC TGCCACCATT CCCGCGTTGC TCGCCGGCCG TGACGTCCTC GGCCAGGCCC AGACCGGCAC CGGCAAGACC GCCGCGTTCG CGCTGCCGGT GCTGTCCAAC GCCGATCTCA ACCAGGTCAA GCCGCAGGCA TTGGTGCTGG CCCCGACCCG CGAACTGGCC ATCCAGGTCG CCGAGGCGTT CCAGAAGTAT GCCGAAGCCA TTCCGGGCTT CCGCGTGCTG CCGGTGTACG GCGGCCAGCC GTATGCCCAG CAACTGAGTG CGCTCAAGCG CGGCGTGCAT GTCGTGGTCG GTACCCCCGG CCGCGTGATC GATCACCTGG ACCGCGGTAC GCTGGATCTG TCCCAGCTCA AGACGCTGGT GCTGGACGAA GCCGACGAAA TGCTGCGCAT GGGCTTTATC GACGACGTCG AAGCGGTACT GAAAAAGTTG CCGGAAAAGC GTCAGGTGGC ATTGTTCTCG GCCACCATGC CGCCGGCCAT CCGTCGCATC GCGCAGACCT ATCTGAAGGA TCCGGCCGAA GTCATCATCG CGGCCAAGAC CACCACTTCG GCCAACATCC GCCAACGCTA CTGGTGGGTG AGCGGGCTGC ATAAGCTGGA TGCGCTGACC CGCATTCTCG AGGTCGAGCC GTTCGACGGC ATGATCATCT TCGCACGCAC CAAGGCCGGC ACCGAAGAGC TGGCGCAGAA GCTGCAGGCG CGCGGTCTGG CCGCGGCCGC CATCAATGGC GACATGCAGC AGGCGGCGCG CGAGAAGACC ATTGCCCAGC TCAAGGACGG CAAGCTGGAC ATCCTGGTCG CCACCGACGT GGCCGCACGC GGCCTGGACG TGGAGCGCAT CAGCCACGTG CTGAACTACG ACATTCCGTA CGACACCGAA AGCTATGTGC ATCGCATCGG CCGCACCGGC CGTGCCGGAC GCACGGGCGA CGCGATCCTG TTCGTGACGC TGCGCGAAAA GGGGATGCTG CGCTCGATCG AACGCGCCAC CCGTCAGCCG ATCGAAGAGA TGCAGCTGCC GAGCGTGGAT GCGGTCAACG ACACGCGCGT GGCGCGTTTC ATGACCCGTA TCACCGAGAC CCTGGCCGGC GGCCAGATCG ACATGTACCG CGATCTGCTG CAGCGCTATG AGGCCGAAAA CAACGTGCCG GCGATCGATA TCGCCGCCGC GATGGCCAAG CTGCTGCAGG GCGATGCGCC GTTCCTGCTG ACTCCGCCGG TGCGTGGCGC ACGCGAAGAC GCCGCGCCGC GCGAGCGTCA TCAGCGTGCC GATCGTGGCG ACCGCCCGCG CTTCGAGCCG AAGTTCGAGC GCGGCCCGCG GGCCGACGGT GAGCGCGCCC CACGTCCGCC GCGTGGCGAC GATGCCGGCG GCGAGCGTCC GCGTCGCGAT CCGGTCGCCC CGCGTGGCGA GCCGGAATTG GGCATGGAGA GCTATCGCAT CGAAGTGGGC CACAGCCATG GCGTGAAGCC GGCCAACATC GTCGGCGCGA TCGCCAACGA AGCCGGGCTG GAAAGCCGCT ATATCGGCCG GATCGACATT CAGGACGATT ATTCGATCCT GGATCTGCCG GCCGACATGC CGCGCGAACT GCTCACCCAC CTGAAGAAAG TCTGGGTGTC CGGTCAGCAG CTCAACATGC GCAAGCTGGA AGAGGGCGAG GCAGCCGCGT CGCCGGCCAA GCCGCGCTTC CCGCGTGGCG GCAAGCCGTC CGGTCGTTCG AACGGCCCGG TCCGTCCGAT GGACCGCGCT GGCGCACCGC ACCGCAAGGG CCCGCCGAAG CCGCGCGGCG AGTAA
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Protein sequence | MRAVANVGYE SPSPIQAATI PALLAGRDVL GQAQTGTGKT AAFALPVLSN ADLNQVKPQA LVLAPTRELA IQVAEAFQKY AEAIPGFRVL PVYGGQPYAQ QLSALKRGVH VVVGTPGRVI DHLDRGTLDL SQLKTLVLDE ADEMLRMGFI DDVEAVLKKL PEKRQVALFS ATMPPAIRRI AQTYLKDPAE VIIAAKTTTS ANIRQRYWWV SGLHKLDALT RILEVEPFDG MIIFARTKAG TEELAQKLQA RGLAAAAING DMQQAAREKT IAQLKDGKLD ILVATDVAAR GLDVERISHV LNYDIPYDTE SYVHRIGRTG RAGRTGDAIL FVTLREKGML RSIERATRQP IEEMQLPSVD AVNDTRVARF MTRITETLAG GQIDMYRDLL QRYEAENNVP AIDIAAAMAK LLQGDAPFLL TPPVRGARED AAPRERHQRA DRGDRPRFEP KFERGPRADG ERAPRPPRGD DAGGERPRRD PVAPRGEPEL GMESYRIEVG HSHGVKPANI VGAIANEAGL ESRYIGRIDI QDDYSILDLP ADMPRELLTH LKKVWVSGQQ LNMRKLEEGE AAASPAKPRF PRGGKPSGRS NGPVRPMDRA GAPHRKGPPK PRGE
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