| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04825 |
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| Symbol | |
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| ID | 6304968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1446838 |
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| End bp | 1448682 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638741 |
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| Product | ATP-dependent RNA helicase |
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| Protein accession | YP_001912618 |
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| Protein GI | 188575689 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCCG TTGCCAATGT CGGCTACGAG TCGCCGTCGC CGATCCAGGC TGCCACCATT
CCCGCGTTGC TCGCCGGCCG TGACGTCCTC GGCCAGGCCC AGACCGGCAC CGGCAAGACC
GCCGCGTTCG CGCTGCCGGT GCTGTCCAAC GCCGATCTCA ACCAGGTCAA GCCGCAGGCA
TTGGTGCTGG CCCCGACCCG CGAACTGGCC ATCCAGGTCG CCGAGGCGTT CCAGAAGTAT
GCCGAAGCCA TTCCGGGCTT CCGCGTGCTG CCGGTGTACG GCGGCCAGCC GTATGCCCAG
CAACTGAGTG CGCTCAAGCG CGGCGTGCAT GTCGTGGTCG GTACCCCCGG CCGCGTGATC
GATCACCTGG ACCGCGGTAC GCTGGATCTG TCCCAGCTCA AGACGCTGGT GCTGGACGAA
GCCGACGAAA TGCTGCGCAT GGGCTTTATC GACGACGTCG AAGCGGTACT GAAAAAGTTG
CCGGAAAAGC GTCAGGTGGC ATTGTTCTCG GCCACCATGC CGCCGGCCAT CCGTCGCATC
GCGCAGACCT ATCTGAAGGA TCCGGCCGAA GTCATCATCG CGGCCAAGAC CACCACTTCG
GCCAACATCC GCCAACGCTA CTGGTGGGTG AGCGGGCTGC ATAAGCTGGA TGCGCTGACC
CGCATTCTCG AGGTCGAGCC GTTCGACGGC ATGATCATCT TCGCACGCAC CAAGGCCGGC
ACCGAAGAGC TGGCGCAGAA GCTGCAGGCG CGCGGTCTGG CCGCGGCCGC CATCAATGGC
GACATGCAGC AGGCGGCGCG CGAGAAGACC ATTGCCCAGC TCAAGGACGG CAAGCTGGAC
ATCCTGGTCG CCACCGACGT GGCCGCACGC GGCCTGGACG TGGAGCGCAT CAGCCACGTG
CTGAACTACG ACATTCCGTA CGACACCGAA AGCTATGTGC ATCGCATCGG CCGCACCGGC
CGTGCCGGAC GCACGGGCGA CGCGATCCTG TTCGTGACGC TGCGCGAAAA GGGGATGCTG
CGCTCGATCG AACGCGCCAC CCGTCAGCCG ATCGAAGAGA TGCAGCTGCC GAGCGTGGAT
GCGGTCAACG ACACGCGCGT GGCGCGTTTC ATGACCCGTA TCACCGAGAC CCTGGCCGGC
GGCCAGATCG ACATGTACCG CGATCTGCTG CAGCGCTATG AGGCCGAAAA CAACGTGCCG
GCGATCGATA TCGCCGCCGC GATGGCCAAG CTGCTGCAGG GCGATGCGCC GTTCCTGCTG
ACTCCGCCGG TGCGTGGCGC ACGCGAAGAC GCCGCGCCGC GCGAGCGTCA TCAGCGTGCC
GATCGTGGCG ACCGCCCGCG CTTCGAGCCG AAGTTCGAGC GCGGCCCGCG GGCCGACGGT
GAGCGCGCCC CACGTCCGCC GCGTGGCGAC GATGCCGGCG GCGAGCGTCC GCGTCGCGAT
CCGGTCGCCC CGCGTGGCGA GCCGGAATTG GGCATGGAGA GCTATCGCAT CGAAGTGGGC
CACAGCCATG GCGTGAAGCC GGCCAACATC GTCGGCGCGA TCGCCAACGA AGCCGGGCTG
GAAAGCCGCT ATATCGGCCG GATCGACATT CAGGACGATT ATTCGATCCT GGATCTGCCG
GCCGACATGC CGCGCGAACT GCTCACCCAC CTGAAGAAAG TCTGGGTGTC CGGTCAGCAG
CTCAACATGC GCAAGCTGGA AGAGGGCGAG GCAGCCGCGT CGCCGGCCAA GCCGCGCTTC
CCGCGTGGCG GCAAGCCGTC CGGTCGTTCG AACGGCCCGG TCCGTCCGAT GGACCGCGCT
GGCGCACCGC ACCGCAAGGG CCCGCCGAAG CCGCGCGGCG AGTAA
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| Protein sequence | MRAVANVGYE SPSPIQAATI PALLAGRDVL GQAQTGTGKT AAFALPVLSN ADLNQVKPQA
LVLAPTRELA IQVAEAFQKY AEAIPGFRVL PVYGGQPYAQ QLSALKRGVH VVVGTPGRVI
DHLDRGTLDL SQLKTLVLDE ADEMLRMGFI DDVEAVLKKL PEKRQVALFS ATMPPAIRRI
AQTYLKDPAE VIIAAKTTTS ANIRQRYWWV SGLHKLDALT RILEVEPFDG MIIFARTKAG
TEELAQKLQA RGLAAAAING DMQQAAREKT IAQLKDGKLD ILVATDVAAR GLDVERISHV
LNYDIPYDTE SYVHRIGRTG RAGRTGDAIL FVTLREKGML RSIERATRQP IEEMQLPSVD
AVNDTRVARF MTRITETLAG GQIDMYRDLL QRYEAENNVP AIDIAAAMAK LLQGDAPFLL
TPPVRGARED AAPRERHQRA DRGDRPRFEP KFERGPRADG ERAPRPPRGD DAGGERPRRD
PVAPRGEPEL GMESYRIEVG HSHGVKPANI VGAIANEAGL ESRYIGRIDI QDDYSILDLP
ADMPRELLTH LKKVWVSGQQ LNMRKLEEGE AAASPAKPRF PRGGKPSGRS NGPVRPMDRA
GAPHRKGPPK PRGE
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