Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04818 |
Symbol | |
ID | 6304916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1408382 |
End bp | 1408807 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642638689 |
Product | cupin domain |
Protein accession | YP_001912566 |
Protein GI | 188575637 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCCG CTGGTGGACC GGGCGAAGCC GCAACGCCGA TCAAGGTGAA CAAGGCGTGC GGGGCGCCAT CGGCAGTGGG GTCGGCCGAG TATTTCACCG GCAAGGTGCG CATCGACGCA CCGTTCCAGG CCGACGCGCC GGCGCGGGTA GGCGGTGCCA CCGTCACCGT CGAGCCGGGC GCGCGCACCG CGTGGCATAC GCATCCGCTG GGCCAGACGC TGATCGTCAC CGCCGGCGCC GGGCGCGTGC AGGAGTGGGG CAAGCCGGCG CAGCAGATCC GCCCGGGCGA CATCGTGTGG ATTCCGCCCG GCGTCAAGCA TTGGCACGGC AGCAATGCCA ACGTGGCGAT GACGCATATC GCCATTGCCG AGTCGCAGGG CGGCACGCCC GTCACCTGGC TGGAGCAGGT GAGCGAGGCG CAATAG
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Protein sequence | MMAAGGPGEA ATPIKVNKAC GAPSAVGSAE YFTGKVRIDA PFQADAPARV GGATVTVEPG ARTAWHTHPL GQTLIVTAGA GRVQEWGKPA QQIRPGDIVW IPPGVKHWHG SNANVAMTHI AIAESQGGTP VTWLEQVSEA Q
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