| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04806 |
|---|
| Symbol | |
|---|
| ID | 6304929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1415519 |
|---|
| End bp | 1416310 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642638702 |
|---|
| Product | outer membrane protein |
|---|
| Protein accession | YP_001912579 |
|---|
| Protein GI | 188575650 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3134] Predicted outer membrane lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCA ATACGACAAC TATACTGGTC GCTGCTGGTG CCTTGCTGGT CGGAGGCGTC
GCCACTGCCG CTTTCATGAA TAACCGCCCG TCGTCCGGCG ATTTTGTGGC CAATGGCCAG
CCGGCACCGC GTGGCCTGGA ATACGCCGAC GTGGTCAGGG TGGCCCCGAT CAGCCAGCGC
GAGCCGCAGT ACGCGCAGGT TATCAACAGC AACGCCATCC GCGAAACCAC CACCAGCACC
TCGCCGCGCG AAGTGTGTCG CGATGTGGTG GTGCAGGAAC GTCTGCCGGA ACGTGACGGC
AATGTCGGTG GCACCGTCGC CGGTGCCATC ATCGGCGGCT TGATCGGCAA CCAGGTGGGC
GGCGGCAACG GTCGCAAGCT GGCGACCGCC GCAGGCGCGG TGGGTGGTGG CTTCATCGGT
AACAGCATCG ACCGCAACCA CGTCGGCGGC CGCGTGGTCG ATCGTACCGA GCGCCAGTGC
CATACCGAAA ATGCCAACTC GCAGTCCTCG CGTGTGGTGG GCTACGACGT GACTTATCGC
AATGCCGATG GCACCACCGG CACCATGCGC ATGGACAGCA AGCCGGGCGA GCGCATTTCG
CTGGGCGACG CCGACAACGT GGTGGCCTAT GACGTCACCT ACCGCTACGA CGGTTTCGAA
AAGACCGTGC GCATGAACGA CAAGCCGGCC AGCGACCGTC TACCGGTGGT CGATGGCCAG
CTGGTGACCC AGATGGCATC GACGGCGGGC GACTCCAACA TCCGTCAGGA TGGTTTGAGC
ACCCGGCAGT AA
|
|---|
| Protein sequence | MKSNTTTILV AAGALLVGGV ATAAFMNNRP SSGDFVANGQ PAPRGLEYAD VVRVAPISQR
EPQYAQVINS NAIRETTTST SPREVCRDVV VQERLPERDG NVGGTVAGAI IGGLIGNQVG
GGNGRKLATA AGAVGGGFIG NSIDRNHVGG RVVDRTERQC HTENANSQSS RVVGYDVTYR
NADGTTGTMR MDSKPGERIS LGDADNVVAY DVTYRYDGFE KTVRMNDKPA SDRLPVVDGQ
LVTQMASTAG DSNIRQDGLS TRQ
|
|---|
| |