| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04793 |
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| Symbol | ompA |
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| ID | 6304943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1426980 |
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| End bp | 1427705 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642638716 |
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| Product | OmpA family protein |
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| Protein accession | YP_001912593 |
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| Protein GI | 188575664 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.188001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCCAG CAGCTACCAA GAGTCTTGCC CTTGCCCTGG CCAGTGCCAT TGCGCTGTCC
GCCTGCGCCA CCGGCGGCTC ATATGTGCAG CGTGATCAGT ACGGCGACCA GACGCAACAG
CAGAATCGGA CCGGTCGCAA TGCGCTGATC GGTACCGCGA TTGGCGTGGC TGCAGGCCTG
CTCACCGGCG ACAGCGCTAC CGAACGTCGT CAGCATGCAA TGATCGGTGC CGGTATCGGT
GCGTTGAGCG GCGCGGCAAT CGGCCAGTAC CAGGATCGCC AGGAACGCGC GTTGCGCGAG
CGCACCGCCA ACACCGGTAT CGAAGTGCAG CGCCAGGGCG ACAACATCAG CCTGAACCTG
CCGGACGGCA TCACCTTCGA CTTCGGCAAG TCTGCATTGA AGCCCGAGTT CTATACCGCG
CTTAACGGCG TGGCCTCCAC GCTGCGCGAG TACAACCAGA CCATGGTGGA AGTGGTTGGG
CATACCGATA GCGTCGGTAG CGATGCGGCG AATCAGCGCC TGTCCGAAGA GCGCGCCGGT
GCAGTGGCGC AGTACCTGAC CGCGCAGGGT GTGCAGCGCG AGCGCATGGA AACCATGGGC
GCCGGCAAGC GTTATCCGAT TGCCGACAAC AACACCGATG CCGGCCGCGC AAAGAACCGT
CGCGTTGAAA TTCGCCTGAT TCCGTTGCGT GCCGAAGGCG CTGCCAGCAA TACCGATATG
CGTTGA
|
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| Protein sequence | MSPAATKSLA LALASAIALS ACATGGSYVQ RDQYGDQTQQ QNRTGRNALI GTAIGVAAGL
LTGDSATERR QHAMIGAGIG ALSGAAIGQY QDRQERALRE RTANTGIEVQ RQGDNISLNL
PDGITFDFGK SALKPEFYTA LNGVASTLRE YNQTMVEVVG HTDSVGSDAA NQRLSEERAG
AVAQYLTAQG VQRERMETMG AGKRYPIADN NTDAGRAKNR RVEIRLIPLR AEGAASNTDM
R
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