Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04784 |
Symbol | |
ID | 6304953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1436614 |
End bp | 1438008 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642638726 |
Product | chloride channel |
Protein accession | YP_001912603 |
Protein GI | 188575674 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.147054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGGTT CAAATCCCCC GCCGCGTCGC TCGCGGCCGC TGTTGTCCAG CGAAGGCTGG CGTCGTCGTG CTGCTCTATG GGGCGGCGCA ATTGCAGTGG CGCTGGTGGC GATCGTGTTC GCCAAGGCCA GCGATGCGGC CTTCCATCTG TTTCAACGCA TCACAGCGCA TTCGATCTGG TGGGCATTTC TGCTGACGCC GGGCATCTTC GCCCTGCTTG CCTGGCTCAC CTCCGGTGCG CTGCGGCCAA CGCGCGGCAG CGGCATCCCG CAAGTGATTG CCGCGCTGGA GCACCCCGAC CCGGCCTTTC GCGACAGCAA CCTCTCGTTG CGCGTCTCGG TCGGCAAGCT CGCGCTGACC ACCTTGTCGC TGCTCGGCGG CGCATCGGTG GGGCGCGAAG GGCCCACCGT GCACGTCGGT GCCAGCCTGA TGCATGTGTT CGGGCGCTGG TTCGGTTTTC GCGAACCGCG CGAGCTCTCG CACTTTCTGC TCGCCGGTGG CGCTGCCGGT ATCGCAGCGG CCTTCAATAC ACCGCTAGCC GGCGTGGTGT TTGCGATCGA AGAACTGAGC GGGCGCTTCG AGCACCGCTT CTCCGGCACC TTGCTCACCG CGGTGATCGT CGGTGGCGTG GTGTCGTTGG GCCTGCTGGG TAATTACACC TATTTCGGCA AGGTAGCTGT CGCCTTACCG CTGGGCCAGG CATGGCTGGC AATCGCATTG TGCGGCAGCG TGGCCGGGTT GCTCGGTGGG GTATTCGCGC GGCTGGTGCT GGCCAGCGTC GGCGGCAAAC CACGCTGGTT GGGCGCGCTA CGTCAGCGGC ATCCGGTGCT GCTGGCTGCG CTGTGCGGCC TCGCCCTGGT CGGTCTTGCG CTGGTGTTCG GGCAAGGCGC CTTCGGCACC GGCTACGAGC AGGCGCGCAG TCTGGTGCAG GGGCACGCGG TCGTCGGCCA TGAGTTCGGC ATGATGAAAC TCATCGCCAA TCTGGTCTCG TATCTGGCCG GCATTCCGGG CGGTCTGTTT TCACCGGCGC TGGCAGTGGG TGCCGGCATC GGTCACAACC TGTCGGTACT GATGCCCAGC GTGGACCCGC GCACCTTCGT GCTGCTGGGC ATGTGCGCGT ATCTCACCGG CGTGACCCAG GCGCCGCTGA CCTCGGCTAT CATCTCGCTG GAACTGACCG ACACCAGCCA GATGCTGCTG CCGATCCTGG CCACCGTACT GATCGCGCGC GCAGTCTCCG GGCTGGTCTG CAAGACGCCG ATCTACCGCG GCCTGGCAGA GCAGTTGTTG ACCGTGCAGG CGCCTGCTGG TCCCGCTGCA GAGCGCGCGT CGACGTCGCG GCTCCAGACC TTGGCCGGAA ACAGCGGCGA GGACAACGCT CCCCCACGAA CATAG
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Protein sequence | MSGSNPPPRR SRPLLSSEGW RRRAALWGGA IAVALVAIVF AKASDAAFHL FQRITAHSIW WAFLLTPGIF ALLAWLTSGA LRPTRGSGIP QVIAALEHPD PAFRDSNLSL RVSVGKLALT TLSLLGGASV GREGPTVHVG ASLMHVFGRW FGFREPRELS HFLLAGGAAG IAAAFNTPLA GVVFAIEELS GRFEHRFSGT LLTAVIVGGV VSLGLLGNYT YFGKVAVALP LGQAWLAIAL CGSVAGLLGG VFARLVLASV GGKPRWLGAL RQRHPVLLAA LCGLALVGLA LVFGQGAFGT GYEQARSLVQ GHAVVGHEFG MMKLIANLVS YLAGIPGGLF SPALAVGAGI GHNLSVLMPS VDPRTFVLLG MCAYLTGVTQ APLTSAIISL ELTDTSQMLL PILATVLIAR AVSGLVCKTP IYRGLAEQLL TVQAPAGPAA ERASTSRLQT LAGNSGEDNA PPRT
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