| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04780 |
|---|
| Symbol | |
|---|
| ID | 6304957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | - |
|---|
| Start bp | 1440283 |
|---|
| End bp | 1441746 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642638730 |
|---|
| Product | DNA methylation and regulatory protein |
|---|
| Protein accession | YP_001912607 |
|---|
| Protein GI | 188575678 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG CGACGCCCGA CCGAACCCAA TGCGACCGTG CCCGCCTGGC GCGCGATGCA
CGTTTCGACG GGTTGTTTTT GACCGCCGTG CGCAGCACCG GCATCTATTG CCGCCCGGTG
TGTCCGGCAC CGCCGCCGAA GCCGGCCAAT GTCAGCGACT ACCCCACTGC CGCGGCGGCC
AGCGCGGCCG GATACCGCCC GTGTCTGCGC TGCCGGCCGG AGCTGTCGCC GCAGGCGCAG
CAGCATCTGG GCGAAGAAAG CGTGCAGCGC GCACTGGCGA TGATTGCCGA CGGCGCGCTG
CAGGAGCAGC CGGTGCAGAC GCTGTCCGAT GCGGTGGGCT TGAGCGCGCG CCAGCTGCAG
CAGCAATTCG TGCAACAGTT GGGTGCCACG CCGATCCAGG TGCACGGGAC GCATCGGCTG
CTGCTGGCCA AGCAATTACT CACCGAAACC GCACTGCCGG TCACCGAGGT GGCGCTCGCA
GCAGGCTTCA ACAGCTTGCG GCGGTTCAAT GCGGCCTTCC TGCAGGGCTG CGGCATGCCG
CCTTCTGCAC TGCGCAAGCA GCGTGCCGAG GTGCCGGGCG GCGAGCTCAC ACTGCGCCTG
GGCTATCGCC CGCCACTGGA TCTGCCGGCG ATGCTGGCCT TCTTGCAGCG CCGTGCGATC
CCGGGGATCG AGCAGGTCGA TGCCAGCGGC GACCGTCGCG TGACCGGCCC GCCGGGCAAG
GCCAGCGTGA TCGGCGTCAG CGCGGCGCCG CAGCGCGCGG AACTCCTGCT GCGCATCGGG
GCGACCGACC CACGCCAGAT TCCGCAGAGC GTGCGGCGCG TGCGACGGCT GTTCGATCTG
GATGCGGACT TGCAAGCCGT GCCCGCGACG CTTGCGCCCG ACCCACTGCT GGCCGAGGCA
ATCGCACGCC GACCAGGCCT GCGCGTGCCC GGTGGTTGGG ACGGCTTCGA GGTGGCGGTA
CGTGCGGTGC TGGGCCAGCA GATCAGTGCC GCCGGCACGG CGACCTTGGC GGCGCGGCTG
GTGGACCCTC ATGGCGGCCA TCATGCCGAC ATGCCACCTG GACTGGATCG CAGTTTCCCC
ACGCCCGACC AGCTGGCCGA CGCGCCACTG GAACAACTCG GGCTACCGCG TGCGGGCGCC
GCCACGCTGC GTGCGCTGGC ATCGGCTTGC GCACAAGGCC AGCTGCACTG CGGTGCCGGG
CAGCGTCTGC CCGACTTCCT CGCCGCCTGC ACCGCGCTAC CCGGAATCGG GCCGTGGACC
GCGCATTACC TGGCCATGCG TGCGTTGTCG CATCCCGATG CGTTTCCGGC TGGCGATTTG
ATCCTGCAGC AGGTGCTCGG CGCCCCCGAG CGCCTGAGCG CGCGCGCCAC CGATGCACGT
TCGCAAGCGT GGCGACCGTG GTGCGCCTAC GCCGTGCTGC ACCTGTGGCA TCTGGCCAAC
GACCGTAAGG ACACCCGCGC ATGA
|
|---|
| Protein sequence | MQIATPDRTQ CDRARLARDA RFDGLFLTAV RSTGIYCRPV CPAPPPKPAN VSDYPTAAAA
SAAGYRPCLR CRPELSPQAQ QHLGEESVQR ALAMIADGAL QEQPVQTLSD AVGLSARQLQ
QQFVQQLGAT PIQVHGTHRL LLAKQLLTET ALPVTEVALA AGFNSLRRFN AAFLQGCGMP
PSALRKQRAE VPGGELTLRL GYRPPLDLPA MLAFLQRRAI PGIEQVDASG DRRVTGPPGK
ASVIGVSAAP QRAELLLRIG ATDPRQIPQS VRRVRRLFDL DADLQAVPAT LAPDPLLAEA
IARRPGLRVP GGWDGFEVAV RAVLGQQISA AGTATLAARL VDPHGGHHAD MPPGLDRSFP
TPDQLADAPL EQLGLPRAGA ATLRALASAC AQGQLHCGAG QRLPDFLAAC TALPGIGPWT
AHYLAMRALS HPDAFPAGDL ILQQVLGAPE RLSARATDAR SQAWRPWCAY AVLHLWHLAN
DRKDTRA
|
|---|
| |