| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04741 |
|---|
| Symbol | |
|---|
| ID | 6304897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010717 |
|---|
| Strand | + |
|---|
| Start bp | 1386067 |
|---|
| End bp | 1387125 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642638670 |
|---|
| Product | ISXoo2 transposase |
|---|
| Protein accession | YP_001912547 |
|---|
| Protein GI | 188575618 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGA CTGCTGTCCA ACCATCCATG AAGAAGAGAG ACGGACGTTT GGTATCGCGG
GCAGCGCTGG AAGAAATGCG CCTGATGGCG TTGCAACGGA TGGGCGAAGG CGAATCGCCG
GCCGAAGTGG CCTCGTCGTT CGGGTTGCAT CGCGGCTGGG CGTACAAAGT GCTGGCGCGA
GCACAGGAGG GCGGCGCTGG CGCATTGATG ACGCGTAAGG GCAGCGGTCG CCCGCGGACG
TTGACGCCGG CGCAGGAGCG CCAGGTGTTC GGCTGGGTCA ATGGTAATAA CCCTCGCCAG
CATGGCTTCG ACTTTGGTTT GTGGACGCTG CAGGTCGTGC GAAAACTGAT CGAGAAGAAG
TTTGCCGCAC GGTTGAGTCT GGCCAGCGTC GGGACGTTGC TGGCGCGGCT GGGGCTGAGC
CCACAGAAGC CGCTGCAACA CGCCTATCAG CGCGATCCAC TGGCGGTAGC GCAGTGGGAG
AAGCAGACGT ACCCGGCGAT CGTGAAGCAC GCCAAGCGGG AAAAGGCCGA GATTGACTTC
TGGGACGCGT CTGGCTTCCG TGCCGATGCG GTGCAAGGAC GGACGTGGGC CGTCAAGGGC
GTCACGCCGG TTGTCGCGGT GCCGGGGCAG CGCCAGAGCA TCAGTGCGGC CTCGGCGGTG
AACAGCAAGG GCGGTTTCTG GTTCGCCGTG TACAGCGGCG GCTTGAACGG TGAATTGTTC
GTGGCCCTGC TCAAGCTGAT GATGAAGGGC CGTCGCCGTC CAATCCATCT GGTGCTTGAT
GGTTTGCCTG CTCACAAGAC CCGTGGCGTG CGCGATGACG TGGACAGCCT GAAGGGCAGG
TTGACGCTGC ATTTCCTGCC GGGTGACGCG CCGGACTTGA ATCCCGACGA GTTGGTGTGG
AGCTACACCA AGCGCACGGG CGTAGCGCGC AGCCCGCTGC GCAGTGGCGA GAAGCTGGCC
GATCAGGTGC ATGATCAGTT GTCCGACATT GCAGCTCGAC CAGAATTGGT GCGCTCGTTC
TTCAGGCATC CAGGTGTCGC CTATATTTCT GACTTATGA
|
|---|
| Protein sequence | MSTTAVQPSM KKRDGRLVSR AALEEMRLMA LQRMGEGESP AEVASSFGLH RGWAYKVLAR
AQEGGAGALM TRKGSGRPRT LTPAQERQVF GWVNGNNPRQ HGFDFGLWTL QVVRKLIEKK
FAARLSLASV GTLLARLGLS PQKPLQHAYQ RDPLAVAQWE KQTYPAIVKH AKREKAEIDF
WDASGFRADA VQGRTWAVKG VTPVVAVPGQ RQSISAASAV NSKGGFWFAV YSGGLNGELF
VALLKLMMKG RRRPIHLVLD GLPAHKTRGV RDDVDSLKGR LTLHFLPGDA PDLNPDELVW
SYTKRTGVAR SPLRSGEKLA DQVHDQLSDI AARPELVRSF FRHPGVAYIS DL
|
|---|
| |