| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04731 |
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| Symbol | tnpA |
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| ID | 6304906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1395498 |
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| End bp | 1396916 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638679 |
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| Product | transposase TnpA, ISL3 family |
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| Protein accession | YP_001912556 |
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| Protein GI | 188575627 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3464] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0781115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTAACA TCCTGAATCT CCCCGACTTC AAGGTGCAGC GGGTGGAGGA AGCCGACCAC
GACTATCACG TCTACGCCGA AGTCTCGAAT CCTCCCGGCG TCTGCACGGC CTGCGGCTCT
GACCGCCTGA TCGGCCACGG TCGCAACGAG CAAGTCGTCC GCGACTTGCC GACGCACGGC
AAGCGACTTG CGATCTACGT GGACACCCGC CGCTGGCGTT GCCAGTCCTG CGGCAAGACC
TTCATGGAGC CGCTGCCCGC CGTCAACGCC AAGCGCGAAA TGACCGACCG GCTGGTGAAG
TGGATCGGCC AGCAGAGCTT GAAGCGCACC TTCGCCAGCA TCGCGGACGA CACCGGCCTG
GATGAGAAGA CCATCCGAAA CATCTTCCGC GACTACATCA ATGAGCTGGA AGCCGAATTC
CGCTTCGAGA CACCGAAGTG GATGGGCATT GACGAGATTC ACCTCATCCG CCCTCGCTGC
GTCATCAGCA ACATCCGCAA CAACACCATC ATCGACATGC TCCCGAACCG GGACAAGAAG
ACGGTGGTGA ACTACCTCTA CAACCTGCAA GGGAAGTCGG AGGTGCAGTA CGTAGCGATG
GACATGTGGA CGCCGTACCG CGATGCCGTG CAGGCGGTCA TTCCTGACGC CCGGATCGTC
ATCGACAAGT TCCACGTCGT GCGCATGGCA AATGACGCCG TGGAGAAGGT CAGGAAGAGC
CTGCGCGAGC AACTGACACC CAAGCAGCGC CGGGGCCTCA TGCACGACCG CTTCGTGCTC
CTGAAGCGTG AGCGCGACCT GAACGACAAG GAAGCGCTGC TGCTGGACGG CTGGACGAAG
AACTATCCCG AGTTGGGAGC CGCGTACAGG CTCAAGGAAG ACTTCTATGC CGTCTATGAG
GGGTCAGCTA GCCCCGAGGC CGCCCTTGCA GCCTACGAGG CTTGGAACAA GGCAGTGGTG
CCGGAAGTAC GGGACGCCTT CGGCGACCTG ATTCGGGCCT TCACCAACTG GCAGCCGTGG
ATCATCAACT ACTTCGAGCA CCCGGTCACC AACGCCTACA CGGAGAGCTT GAACAGCTTG
ATCCGGGTGA TGAACCGACT GGGACGCGGC TACAGCTTCG AGGCGCTGCG GGCCAAGATT
CTGTTCACCG AGGGCGCGCA CAAGCACAAG CTCAGCCGCC CGAAGTTCGA GCGGCGGCGC
GAGCCGGATT TGGCGATGGC GGAAGAAGTC GCCGGGTACG GCGTCCCGGA CGATGCGATG
GGCTATGGCC TGCCACCGGG GCACTTCGGA AAGGCAGTTA TGACGCCAAG GAAGAGCACG
CCAAAGGTCG AGCACCCACA CGAACCGCCA GGGCCACCGA AGAACTACGG GGCCGACATA
AACACACTAA TCGAACTACT AGAATCCGGG AGGCTGTGA
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| Protein sequence | MANILNLPDF KVQRVEEADH DYHVYAEVSN PPGVCTACGS DRLIGHGRNE QVVRDLPTHG
KRLAIYVDTR RWRCQSCGKT FMEPLPAVNA KREMTDRLVK WIGQQSLKRT FASIADDTGL
DEKTIRNIFR DYINELEAEF RFETPKWMGI DEIHLIRPRC VISNIRNNTI IDMLPNRDKK
TVVNYLYNLQ GKSEVQYVAM DMWTPYRDAV QAVIPDARIV IDKFHVVRMA NDAVEKVRKS
LREQLTPKQR RGLMHDRFVL LKRERDLNDK EALLLDGWTK NYPELGAAYR LKEDFYAVYE
GSASPEAALA AYEAWNKAVV PEVRDAFGDL IRAFTNWQPW IINYFEHPVT NAYTESLNSL
IRVMNRLGRG YSFEALRAKI LFTEGAHKHK LSRPKFERRR EPDLAMAEEV AGYGVPDDAM
GYGLPPGHFG KAVMTPRKST PKVEHPHEPP GPPKNYGADI NTLIELLESG RL
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