| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04713 |
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| Symbol | |
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| ID | 6304859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1337688 |
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| End bp | 1339382 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642638632 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001912509 |
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| Protein GI | 188575580 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTTCG TCGGCGCGTT GTGGGTGGGG CTGCTGCTGT TCGGCGTATT CGCGGCGGTA
TCGGTACAGA AGAGCGTGCG CGATCGCGTC GACGGCATCG GCGTGACGGC GATCCACCAT
GGAGAGGCCG GGTGTTCGGT CGTCGCCGCG CTGTCGCTGC TGACCGTCGG TCTGTGCAAC
GCGACGCCGC CTCTGAGCGC AAAAATCGTG GAAGCGGTGT TCGCCGACTA TGCGCCGATG
GCAAGCTGGC AGTGGAGCGA GGAGACGAGC GCGTTCCTGG CCCAGGCGCG GCCGCGCAGC
TACTGCGTGC AGTACCGCGA GAGCGACCTG GATTTCGTGC AGCGGCTGCT GGCCGAGGAA
GGCCTGGGCT GGCGGCTGCA GGAGGCGGCC CCGTCGCCCG GCGGGCACCA GCTGGTGGTG
TTCGCCGACA GCGTCGCGCA ACCGCAGGAC CCCAGTTCGG CGCAGGGCGG CGGGCTGCGC
TACCACCGCA GCGACGCCAC CGAGGCGGCC GACAGCGTGC TGGCGATCGG CGCCACCCGG
CGGCTGGGCA GCGGCCGGCT GACGGTGCTC AGCGAAGACT TCAAGACGCG TCAGGCGCGC
AGCGCGCAGT TGCCGTTGCA CGGCGGCGGC AGGCAGTCGC TGCGCGAGGT GTACGAGCCG
GTGGGGATGG ACGCCTTCGC CAGCGCGCAG GCAGCAGACC GCTCTGCGGA GTTGATGGCG
CAGGCGCACG AGGCGCAGTG GTCGCCGTGG CAGGGCCGCA GCACGGTGCG CACGCTGCGC
GCCGGCACCT GGTTCACGCT GACCCAGTCA CCGCAGCAGG GCCAGGCACC GCCGGCGCAG
CTGTTGCTGA CGCGGGTGTG GCATGCGGGT ATCAACAACT TGCCGGTGGA CGTGCGCGCG
GCGGTGCAGT CGCAGTTGGG GGCCGCGCCG GCGTGGCCGG ACGCCAGCGC GGTGGCCGCA
CGCAGCACCT GGGCGCAGGC CGAGGCGGTG GGCTACGGCA ACGCCTTCGA GGCGGTGGAC
CGGCAGCAGC CGTGGCGGCC AGTGCTGGCC GACGGCACCG GGGCGCGGCT GCACCCGCGG
CCGACCGCGC CGGGCTACCA GAGCGCCATC GTGGTCGGTG CCGATGGCAG CACCGACGGC
AGCCAGGAGG TCCATGCCGA CGCGCTGGGC CGGATCCGGG TCAGGTTCCA CTTCCAGCAC
GCCGCGTCGG CCCCGGCCGC GCAGGACAGC ACGTGGCTGC GGGTGGCGCA GCGCTACGCC
GGCCCGGGCG TGGGCAGCCA GTTCCTGCCA CGCATCGGCC AGGAAGTGCT GGTGGGCTTC
CTGGAGGGGG ACATCGACCG TCCGGTGGTG CTGGGGGCGC TGTACAACGG CAAGGGCGAA
GCCGGCGTTC CCGCCACCCC CGGCGGCACC AGCGCCGAGG CCGACACCGG CCTGTACGCC
AAGGCCGGCG ACGGCAGACC CAGCGCGCAG GGCAACCTGG CCGGCGGCCA TGCCCCGGCC
TGGCACGGCG CCGGCGGCGG TGCGGACAAC CACCGCAACG CCACCGCGCT GTGGACAACC
ACCGCAACGC CACCGCGCTG TGGGGCGTGC AATCCAAGGA ATGGGGCGGC GCTGGCCACA
GCCGGCTGGT GTTCGACGAC AGCGACCAGC AATTGCGCTT GCAACTTGCG ACCACCCAGG
CAGCCACGCA ACTGA
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| Protein sequence | MAFVGALWVG LLLFGVFAAV SVQKSVRDRV DGIGVTAIHH GEAGCSVVAA LSLLTVGLCN
ATPPLSAKIV EAVFADYAPM ASWQWSEETS AFLAQARPRS YCVQYRESDL DFVQRLLAEE
GLGWRLQEAA PSPGGHQLVV FADSVAQPQD PSSAQGGGLR YHRSDATEAA DSVLAIGATR
RLGSGRLTVL SEDFKTRQAR SAQLPLHGGG RQSLREVYEP VGMDAFASAQ AADRSAELMA
QAHEAQWSPW QGRSTVRTLR AGTWFTLTQS PQQGQAPPAQ LLLTRVWHAG INNLPVDVRA
AVQSQLGAAP AWPDASAVAA RSTWAQAEAV GYGNAFEAVD RQQPWRPVLA DGTGARLHPR
PTAPGYQSAI VVGADGSTDG SQEVHADALG RIRVRFHFQH AASAPAAQDS TWLRVAQRYA
GPGVGSQFLP RIGQEVLVGF LEGDIDRPVV LGALYNGKGE AGVPATPGGT SAEADTGLYA
KAGDGRPSAQ GNLAGGHAPA WHGAGGGADN HRNATALWTT TATPPRCGAC NPRNGAALAT
AGWCSTTATS NCACNLRPPR QPRN
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