| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04700 |
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| Symbol | |
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| ID | 6304847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1321632 |
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| End bp | 1324571 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642638620 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001912497 |
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| Protein GI | 188575568 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGTCCG ACAGCGGTCG CCTATACCGC TTGCAGCTGC CTGGCGGGGA TGTCCAGGTG
GTGGAGCGCT GGAGCGGGTC GGAACGGCTG AGCGGCGGTT TTGAGTGGTG GGTGGACGTG
CTGAGCACGC AGGCGGGCTT GCCGCTGGAG GCGTGGCTGG GGCGGCGCGC GACGCTGTAC
AGCCGGCTGG CCGATGGCGA TGAAAGCCCG CGCACGGGGC TGATCCACGA CGCGTACGCA
CTGGGCAGCG ACGGCGGGCT GGCGCGCTAC CGGGTAGGCC TGGTGCCGTG GACGTGGTGG
TTGTCGCAGG GCCGGCACAG CCGGGTATTC CAGGAACGCA CGCTGGTGCA GATCGTGGAA
GCGGTGTTCG CCGACTATGC GCCGATGGCA AGCTGGCAGT GGAGCGAGGA GACGAGCGCG
TTCCTGGCCC AGGCGCGGCC GCGCAGCTAC TGCGTGCAGT ACCGCGAGAG CGACCTGGAT
TTCGTGCAGC GGCTGCTGGC CGAGGAAGGC CTGGGCTGGC GGCTGCAGGA GGCGGACGCG
TCGCCCGGCG GGCACCAGCT GGTGGTGTTC GCCGACAGCG CCGCGCAACC GCAGGACCCC
AGTTCGGCGC AGGGCGGCGG GCTGCGCTAC CACCGCAGCG ACGCCACCGA GGCGGCCGAC
AGCGTGCTGG CGATCGGCGC CACCCGGCGG CTGGGCAGCG GCCGGCTGAC GGTGCTCAGC
GAAGACTTCA AGACGCGCCA GGCGCGCAGC GCGCAGTTGC CGTTGCACGG CGGCGGCAGG
CAGTCGCTGC GCGAGGTGTA CGAGCCGGTG GGGATGGACG CCTTCGCCAG CGCGCAGGCA
GCAGACCGCT CTGCGGAGTT GATGGCGCAG GCGCACGAGG CGCAGTGGTC ACCGTGGCAG
GGCCGCAGCA CGGTGCGCAC GCTGCGCGCC GGCACCTGGT TCACGCTGAC CCAGGCACCG
CAGCAGGGCC AGGCGCCGCC GGCGCAGCTG TTGCTGACGC GGGTGTGGCA TGCGGGTATC
AACAACTTGC CGGTGGACGT GCGCGCGGCG GTGCAGTCGC AGTTGGGGGC CGCGCCGGCG
TGGCCGGATG CCAGCGCGGT GGCCGCACGC AGCACCTGGG CGCAGGCCGA GGCGGTGGGC
TACGGCAACG CCTTCGAGGC GGTGGACCGG CAGCAGCCGT GGCGGCCGGT GCTGGCCGAC
GGCACCGGGG CGCGGCTGCA CCCGCGGCCG ACCGCGCCGG GCTACCAGAG CGCCATCGTG
GTCGGTGCCG ATGGCAGCAC CGGCGGCAGC CAGGAGGTCC ATGCCGACGC GCTGGGCCGG
ATCCGGGTCA GGTTCCACTT CCAGCACGCC GCGTCGGCCC CGGCGGCGCA GGACAGCACG
TGGCTGCGGG TGGCGCAGCG CTACGCCGGC CCGGGCGTGG GCAGCCAGTT CCTGCCACGC
ATCGGCCAGG AAGTGCTGGT GGGCTTCCTG GAGGGGGACA TCGACCGTCC GGTGGTGCTG
GGGGCGCTGT ACAACGGCAA GGGCGAAGCC GGCGTTCCCG CCACCCCCGG CGGCAGCAGC
GCCGAGGCCG ACACCGGCCT GTACGCCCAG GCCGGCGACG GCAGACCCAG CGCGCAGGGC
AACCTGGCCG GCGGCCATGC CCCGGCCTGG CACGGTGCCG GCGGCGGCGC GGACAACCAC
CGCAACGCCA CCGCGCTGTG GGGCGTGCAA TCCAAGGAAT GGGGCGGCGC TGGCCACAGC
CGGCTGGTGT TCGACGACAG CGACCAGCAA CTGCGCTTGC AGCTGGCCAC GACCCAGGCA
GCCACGCAAC TGAACCTGGG GCACCTGATC CACCAGGCCG ACAACTACCG CGGCAGCTTC
CGCGGGGAAG GCTTCGAACT GCGCACCGAC GCGTGGGGCG CGGTGCGGGC CAGCTCGGGG
CTATGGCTGA GCAGCTACGG CCGCAGCGGC GGCCCGGCCG GCGAGGCGAC CCAGCCCAGC
GCATTGCTGA GCCAGCTGCA GACGCTGGGC AAGACGTTCT CGCAGGCGGC GGGCACGCAC
CAGACGGTGA AGCTGGCCGC GCACGAAGGC GTGGGCCAGG CGAACCACTC CCAGCTGATC
GCCGAGCAGG CACCGCTGCC GGCGCTGCTG ACCAGCGTGA AGACCACGGT GCCGGGCACG
GCCTACGCCG ACGCCAAGGG TGCGGCGGCC GAGCGCCGCG CCAGCCCGGG CGATGACCGG
GTGCCGCACA CCGGCGATGC GCTGCTGGGC CTGGCGGCAC CAGCGGGGAT CGGCGTGGTG
GCCGGCCAGG GCCTGAGCTG GAGCGTGGGC GAGACGCTGA CGCTGGCCAG CGGCGCGGGC
AGCGAAGCGG CCATCGCCGG CGACGCCCGG CTGCACAGCG GCCAGGCGAT CGGCGTGCTG
GCCGCGGCGG TGGACGGCGG GCAAACGCAG GCGCACAGCC TGAGCCTGGT CAGCGGCGAA
GGCGCGCTGG ACGTGCAGGC GCAGTCGGAC GACGTGCGCG TACAGTCGAA AGAAGGACTG
AAGCTGATCA GCGCCAACGC CGACGTGGCC CTGGCGGCGG GCAAGACCCT CCACCTGGCG
GTGGCCGGCG GGGCCAGCGT GACCATCGAA GGCGGCAACA TCACCGTCGC CTGCCCCGGC
ACCATCACCG TGCATGCGAG CAAGAAGTCG TTTGTGGGGC CGGTCGAAAA GTCCTACAAG
CTTCCCGTTC CCGGAGCGAC GCCGTACAAG CTGAAATACG TGTTGCGTGA CTACACGGGT
GAACCGCTCA AGAGCGCCGA GTACGCCATG TATCTGGCTG ACGGTTCGGT GGTGACCGGC
AAAACGAATG CACAAGGCGA AACCGAACAA GTGATCACGG ATGGTCCCGA CAGCGTGCAT
CTGATGGTCT CCGACGAACG TCACGAAGGG TATTACAAGG TGTCCGATGG CAACGCATGA
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| Protein sequence | MLSDSGRLYR LQLPGGDVQV VERWSGSERL SGGFEWWVDV LSTQAGLPLE AWLGRRATLY
SRLADGDESP RTGLIHDAYA LGSDGGLARY RVGLVPWTWW LSQGRHSRVF QERTLVQIVE
AVFADYAPMA SWQWSEETSA FLAQARPRSY CVQYRESDLD FVQRLLAEEG LGWRLQEADA
SPGGHQLVVF ADSAAQPQDP SSAQGGGLRY HRSDATEAAD SVLAIGATRR LGSGRLTVLS
EDFKTRQARS AQLPLHGGGR QSLREVYEPV GMDAFASAQA ADRSAELMAQ AHEAQWSPWQ
GRSTVRTLRA GTWFTLTQAP QQGQAPPAQL LLTRVWHAGI NNLPVDVRAA VQSQLGAAPA
WPDASAVAAR STWAQAEAVG YGNAFEAVDR QQPWRPVLAD GTGARLHPRP TAPGYQSAIV
VGADGSTGGS QEVHADALGR IRVRFHFQHA ASAPAAQDST WLRVAQRYAG PGVGSQFLPR
IGQEVLVGFL EGDIDRPVVL GALYNGKGEA GVPATPGGSS AEADTGLYAQ AGDGRPSAQG
NLAGGHAPAW HGAGGGADNH RNATALWGVQ SKEWGGAGHS RLVFDDSDQQ LRLQLATTQA
ATQLNLGHLI HQADNYRGSF RGEGFELRTD AWGAVRASSG LWLSSYGRSG GPAGEATQPS
ALLSQLQTLG KTFSQAAGTH QTVKLAAHEG VGQANHSQLI AEQAPLPALL TSVKTTVPGT
AYADAKGAAA ERRASPGDDR VPHTGDALLG LAAPAGIGVV AGQGLSWSVG ETLTLASGAG
SEAAIAGDAR LHSGQAIGVL AAAVDGGQTQ AHSLSLVSGE GALDVQAQSD DVRVQSKEGL
KLISANADVA LAAGKTLHLA VAGGASVTIE GGNITVACPG TITVHASKKS FVGPVEKSYK
LPVPGATPYK LKYVLRDYTG EPLKSAEYAM YLADGSVVTG KTNAQGETEQ VITDGPDSVH
LMVSDERHEG YYKVSDGNA
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