Gene PXO_04690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04690 
Symbol 
ID6304604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1096445 
End bp1098097 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content59% 
IMG OID642638379 
ProductISXo8 transposase 
Protein accessionYP_001912261 
Protein GI188575332 
COG category[L] Replication, recombination and repair 
COG ID[COG5659] FOG: Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCA TCACGTCTCT TGTCGCTTAC TCCAAGAAAA CAAAATCTCA CGTCGCCACG 
TTGAACTACG ACAATCTCCT TTATCAACCC ATGATTAAAG AAGAAGTTCT CGATGGCTAT
AACGGAGCAC TTGTGGACGG ATTTTGGAAA AATGGATTCG CAGAAGACAA CCTGGAGAGG
AAATACGGGC GCGACTTCAG CTATTACATG CACCTGCACG GATCGCCGTT GTTTGTTGAT
CGAGATGACG GCGATAGAGA TAATTCCACT GTGTTACAAA TAATCGTATC TTTGTGCCAC
TATTGGAAGA CCTTCAGGCC GCGTGGGAGA GCTGTGTTGA ATAGGTCACT GGAAGTGCGT
TTTGAACAGT ACGGGGAAGT AGTTGCTGCC GCCCTGTCCC ATGCGGATCG CAAACAGCCC
GCACACTGGT ACCTGAAGGG GTTGCTACTG CCTGGAGGGC GCAAGAGCGT GGAGCCCATG
GCCGCGCGGG TGCACCCGCA GAACGTGCGC TCAGCCCATC AATCGATGCA CCATCTGGTG
GCCGATGCCG ACTGGAGCGA TCAAGCGCTG CTGGCGGCGG TGGCGGCACA GGTGCTGCCG
ACCCTGAGCA GGAAGAGCGC AGCGTGTCAC TGGATCGTGG ACGACACGGG ATTTTCAAAG
AAAGGGGTGC ATTCGGTCGG TGTTGCACGC CAGTACTGCG GCCGCCTTGG CAAGACGGAC
AATTGCCAGG TTGCCGTGAG TTTGTCGATC GCCAACGAAC ACGGCAGCCT GCCAGTGGGC
TATCGGCTGT ATCTTCCCGA GCAGTGGGCT CAGGACACTG TGCGGCGCAA GAAGGCAGGC
GTTCCGGATC AGGTCGTGTT TCAGACCAAG ACAGCGCTGG CCATGGATCA GATCGACAGC
GCGCTGGCGA CAGGGATGGC GGCAGGCGTC GTGCTAGCCG ATGCGGCCTA CGGCACCGAG
ACCCACTGGC GAGACCAGCT CAGCGAACGC GGCCTGCTGT ACATGGTTGG CGTCCGCAGC
AACACGAAGG TCTGGTGGGG ATCGCACCAA CCTGCGCCCA TGCCGCCAGC CAGCCCTAAG
GGCGGTCGGC CCCGCACACG ACCGATGCGC GATAGCGCAC ATGCGCCGAT CTCGGTACAT
GAAGTCGCGC AGCGCTTGCC CGCAAGGACG TATCGGCAGG TCAGCTGGCG CCAGGGCAGC
GACGCAACGC TCAGTTCGCG GTTCGCGGCG GTGCGGGTTC GTGCCGCACA CAATCGCCAG
GCACATGACG AGCAGTGGCT GCTGATCGAG TGGCCGCCGG GAGAGTCCGA GCCCCGCCAC
TACTGGTTCT CGACGCTACC AAAGCAAACG CCGGTCAAGA CACTGGTTGC CACGGCACAA
GGCCGATGGC GGATTGAACG CGATTATCAG GAGCTGAAGT CGGAGTTGGG CCTGCATCAC
TATGAAGGGC GCAACTGGCG TGGTTTTCAC CATCACGCCA GTCTGTGCAT CGCCGCATAC
GGGTTCTTGA TGCGCGAGCG CCTGCGCAGT AAAAAAAACT CCGTCGCATT CAAGATGCCT
GCAGTATCCA AAAGCGTCCG CCCGCGCCGG TCTGGCCCCA ATGCAACGTC ACCATCCCAA
CTCGATTGCC ACGCTGGCCT TCGGACTGGC TAG
 
Protein sequence
MDFITSLVAY SKKTKSHVAT LNYDNLLYQP MIKEEVLDGY NGALVDGFWK NGFAEDNLER 
KYGRDFSYYM HLHGSPLFVD RDDGDRDNST VLQIIVSLCH YWKTFRPRGR AVLNRSLEVR
FEQYGEVVAA ALSHADRKQP AHWYLKGLLL PGGRKSVEPM AARVHPQNVR SAHQSMHHLV
ADADWSDQAL LAAVAAQVLP TLSRKSAACH WIVDDTGFSK KGVHSVGVAR QYCGRLGKTD
NCQVAVSLSI ANEHGSLPVG YRLYLPEQWA QDTVRRKKAG VPDQVVFQTK TALAMDQIDS
ALATGMAAGV VLADAAYGTE THWRDQLSER GLLYMVGVRS NTKVWWGSHQ PAPMPPASPK
GGRPRTRPMR DSAHAPISVH EVAQRLPART YRQVSWRQGS DATLSSRFAA VRVRAAHNRQ
AHDEQWLLIE WPPGESEPRH YWFSTLPKQT PVKTLVATAQ GRWRIERDYQ ELKSELGLHH
YEGRNWRGFH HHASLCIAAY GFLMRERLRS KKNSVAFKMP AVSKSVRPRR SGPNATSPSQ
LDCHAGLRTG