| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04682 |
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| Symbol | |
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| ID | 6304611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1106995 |
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| End bp | 1107993 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642638386 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_001912268 |
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| Protein GI | 188575339 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.965401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATCG GCCCCTACTC CATCGCCCCC AAGGTGATCC TCGCGCCCAT GGCGGGCGTC
ACCGACAAGC CGTTCCGGCT GCTGTGCAAG CGGCTGGGCG CTGGGCTGGC AGTGTCGGAG
ATGACCATCT CCGACCCGCG CTTCTGGGGC ACGCGCAAGT CGCTGCACCG CATGGACCAT
GCCGGCGAAC CGGACCCGAT CAGCGTGCAG ATCGCCGGCA CCGAGCCGCA GCAACTGGCC
GAGGCGGCGC GCTATAACGT CGACCACGGC GCGCAATTGA TCGATATCAA CATGGGCTGC
CCGGCCAAGA AAGTGTGCAA TGCCTGGGCT GGCTCGGCGC TGATGCGCGA TGAAGAGCTG
GTGGCACGCA TCCTCACCGC GGTGGTGCAG GCGGTGGACG TGCCGGTGAC GTTGAAGATC
CGCACCGGGT GGGATTGCGA CCACCGCAAC GGCCCGACCA TCGCGCGTCT CGCACAGGAC
TGCGGCATCG CCGCGCTCGC CGTGCACGGG CGCACCCGCG ACCAGCATTA CACCGGCAGC
GCCGAATACG CGACGATTGC GCAGATCAAG GCAGCACTGC GGATTCCAGT GGTTGCCAAT
GGCGATATCG ACTCGCCGCA AAAGGCCGCG CAGGTGCTGC GCGAGACCGG CGCCGACGCG
GTGATGATCG GCCGCGCCGC ACAAGGGCGC CCGTGGATCT TTGGCGAAGT GGCGCATTTT
CTGGCCACCG GCGAAGTGTT GCCGCCGCCG TCGCTGGCAT TCGTGCGCGA CACCCTGCTC
AGCCACCTGG AAGCACTGCA CGCGTTCTAC GGCCAACCCC AGGGCGTGCG CATCGCACGC
AAGCACCTGG GTTGGTATGC CAAGGATCAC CCCCAGAGCG CGGACTTCCG TGCGGTGGTC
AATCGCGCCG AAACGCCGGA AGCCCAGTTG GCCCTGACGC GCGATTACTT CGATGCCTTG
ATCGCCGGCG TGCCGCCCGC ATTGCCGGAC GCTGCCTGA
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| Protein sequence | MQIGPYSIAP KVILAPMAGV TDKPFRLLCK RLGAGLAVSE MTISDPRFWG TRKSLHRMDH
AGEPDPISVQ IAGTEPQQLA EAARYNVDHG AQLIDINMGC PAKKVCNAWA GSALMRDEEL
VARILTAVVQ AVDVPVTLKI RTGWDCDHRN GPTIARLAQD CGIAALAVHG RTRDQHYTGS
AEYATIAQIK AALRIPVVAN GDIDSPQKAA QVLRETGADA VMIGRAAQGR PWIFGEVAHF
LATGEVLPPP SLAFVRDTLL SHLEALHAFY GQPQGVRIAR KHLGWYAKDH PQSADFRAVV
NRAETPEAQL ALTRDYFDAL IAGVPPALPD AA
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