Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04675 |
Symbol | |
ID | 6304618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1115157 |
End bp | 1116560 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642638393 |
Product | ISXo8 transposase |
Protein accession | YP_001912275 |
Protein GI | 188575346 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCCTGCG CTAGTTCCAC TGTGTTACAA ATAATCGTAT CTTTGTGCCA CTATTGGAAG ACCTTCAGGC CGCGTGGGAG AGCTGTGTTG AATAGGTCAC TGGAAGTGCG TTTTGAACAG TACGGGGAAG TAGTTGCTGC CGCCCTGTCC CATGCGGATC GCAAACAGCC CGCACACTGG TACCTGAAAG GGTTGCTACT GCCTGGAGGG CGCAAGAGCG TGGAGCCCAT GGCCGCGCGG GTGCACCCGC AGAACGTGCG CTCAGCCCAT CAATCGATGC ACCATCTGGT GGCCGATGCC GACTGGAGCG ATCAAGCGCT GCTGGCGGCG GTGGCGGCAC AGGTGCTGCC GCCCCTGAGC AGGAAGAGCG CAGCGTGTCA CTGGATCGTG GACGACACGG GATTTTCAAA GAAGGGGGTG CATTCGGTCG GTGTTGCACG CCAGTACTGC GGCCGCCTTG GCAAGACGGA CAATTGCCAG GTTGCCGTGA GTTTGTCGAT CGCCAACGAA CACGGCAGCC TGCCAGTGGG CTATCGGCTG TATCTTCCCG AGCAGTGGGC TCAGGACACT GTGCGGCGCA AGAAGGCAGG CGTTCCGGAT CAGGTCGTGT TTCAGACCAA GACAGCGCTG GCCATGGATC AGATCGACAG CGCGCTGGCG ACAGGGATTG CGGCAGGCGT CGTGCTAGCC GATGCGGCCT ACGGCACCGA GACCCACTGG CGAGACCAGC TCAGCGAACG CGGCCTGCTG TACATGGTCG GCGTCCGCAG CAACACGAAG GTCTGGTGGG GATCGCACCA ACCTGCGCCC ATGCCGCCAG CCAGCCCTAA GGGCTGTCGG CCCCGCACAC GACCGATGCG CGATAGCGCA CATGCGCCGA TCTCGGTACA TGAAGTCGCG CAGCGCTTGC CCGCAAGGAC GTATCGGCAG GTCAGCTGGC GCCAGGGCAG CGACGCAACG CTCAGTTCGC GGTTCGCGGC GGTGCGGGTT CGTGCCGCAC ACAATCGCCA GGCACATGAC GAGCAGTGGC TGCTGATCGA GTGGCCGCCG GGAGAGTCCG AGCCCCGCCA CTACTGGTTC TCGACGCTAC CAAAGCAAAC GCCGGTCAAG ACACTGGTTG CCACGGCACA AGGCCGATGG CGGATTGAAC GCGATTATCA GGAGCTGAAG TCGGAGTTGG GCCTGCATCA CTATGAAGGG CGCAACTGGC GTGGTTTTCA CCATCACGCC AGTCTGTGCA TCGCCGCATA CGGGTTCTTG ATGCGCGAGC GCCTGCGCAG TAAAAAAAAC TCCGTCGCAT TCAAGATGCC TGCAGTATCC AAAAGCGTCC GCCCGCGCCG GTCTGGCCCC AATGCAACGT CACCATCCCA ACTCGATTGC CACGCTGGCC TTCGGACTGG CTAG
|
Protein sequence | MACASSTVLQ IIVSLCHYWK TFRPRGRAVL NRSLEVRFEQ YGEVVAAALS HADRKQPAHW YLKGLLLPGG RKSVEPMAAR VHPQNVRSAH QSMHHLVADA DWSDQALLAA VAAQVLPPLS RKSAACHWIV DDTGFSKKGV HSVGVARQYC GRLGKTDNCQ VAVSLSIANE HGSLPVGYRL YLPEQWAQDT VRRKKAGVPD QVVFQTKTAL AMDQIDSALA TGIAAGVVLA DAAYGTETHW RDQLSERGLL YMVGVRSNTK VWWGSHQPAP MPPASPKGCR PRTRPMRDSA HAPISVHEVA QRLPARTYRQ VSWRQGSDAT LSSRFAAVRV RAAHNRQAHD EQWLLIEWPP GESEPRHYWF STLPKQTPVK TLVATAQGRW RIERDYQELK SELGLHHYEG RNWRGFHHHA SLCIAAYGFL MRERLRSKKN SVAFKMPAVS KSVRPRRSGP NATSPSQLDC HAGLRTG
|
| |