Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04642 |
Symbol | |
ID | 6304648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1143900 |
End bp | 1146341 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642638423 |
Product | organic solvent tolerance protein |
Protein accession | YP_001912305 |
Protein GI | 188575376 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0686354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCCGAG CTCTCCGCCT GCTGCCCCTG CCTTTAAGCA TCGCCATCTG CCTTCCGGCC ATGGCTGCCG ACAAGCCGTT CAACTGGGGA TTGTGCCCGA CCGTGGACCC GCTGCCCGGC TTCGACGGCG CCCCCGCCGC GGACCCCAAG GCAGCAGAAA TGCGTCAACA GTTGCCGACC GACATCGAAG GCGACCAGCT CTCCGGCACC AGCACCACTC CGCAGTACCA GGGCAACGTG GCGCTCAAGC GCGGCGACCA GTTCCTGGGC GCGGACAACC TGCGCATGGA CACCGAAACC GGCAACTACA TCGCCGAAGG CAATGTCCGT TACCAGGACA CCTCCTTCCG CATGGTCGCC GACCGCGCCG AAGGCAATCA GGACACCGAC ACCCACAAGG TCACCAACAT CCGGTATCAG TTGGTGGAGC GCCGCGGCAA TGGCGACGCC GAGTCGGTGG ACCTGCAGGG CCAGGTCGGG CAGATGCACC GCTCCACCTA CACCACCTGC GATCCCTCAC AGCCGATCTG GCGCGTCCGC GCGCCCGAAA TCGACGTCGA TAACGGAGAG GGCTTCGGCA CCGCACGCAA TGCCGTGCTG CAGATCGGCA ACGTGCCGGT GCTCTACTTC CCGTGGTTCA AGTTCCCGAT CGACGACCGC CGCCAGACCG GCCTGCTGTT TCCGCAATTC GGTTTGTCCC GCCGTAACGG CTTCGATTAC CTGCAGCCGA TCTATCTGAA CCTGGCGCCG AACTACGACG CCACGTTGTT GCCGCGCTAT ATGAGCAAGC GCGGTTTCAT GTTCGGGACC GAATTCCGGT ACCTGTACGA GGGCGGTCGC GGCGAAGTCA CCGGCAATTA CCTGCCCAAC GACAAGTTGC GCGACAAGGA CCGGGGCAGC GTTTTTTACA GCGGCTACCA CAACGTCAAT AGCAACTGGC AGGCACGCAG CAGCATTTCC TGGGTCAGCG ATACACGCTA TGTCGAGGAC TTCACCAGCC GCCTGAACGG CATGGGCTCG GCCTCCAGCC TGCAAAGTAC CGTGGGCATC TACGGCACCG GCGAAACCTG GACCGCCGGT CTGATGGCCG AGCGCTGGCA GCTGACCGAC TATACCCTGG ACGAGCGATC GCTACCCTAC AACCGGCAGC CGCGCGCCTA TTTCAACTGG GAAAAACCGT TCGGCATTTT CGAGGCGGGC GTCTACGCCG AAGCAGTGCG TTTCACCCAT GACGACTCCT ACTTCGTCCA GCCTCCAAGC CCCAGCGTTC CAGGCGAAGC AAACAACCGC GACAATAACG ACAAATACGT CCGCACCAAC ATCCGCAACC AGGAATACGG CAGCGGTTCG CGCCTGGATC TCAAGCCGTA TGTCTCGATG CCATTGTCCG GCGCAGCCTG GTTCTTTACT CCAACGCTGG CCTGGCGCTA CACCGCGTAT CAGCTGGATT CGACGTTGGC CAAGACCGGG CCGCTGACCG GTGATCGTTC GCCCTCGCGT AGCCTGCCGA TCGCGTCCGT GGACGCCGGC CTGTATTTCG ATCGAGAGAC CTCGCTGTTG GGCACCAACT ATCTCAACAC GCTGGAACCG CGCATGTACT ACCTGTACGT GCCGTACCGC GACCAGGATG ACCTGCCGGT CTTCGATACC CGCCCGTTCA CTTTCAGCTA CGGGCAGCTG TTCCGCGATA CGCGCTACAC CGGTGCCGAC CGCCAGAACG ACGCCAACCA GCTGACCCTG GCAGTCACCT CGCGCTGGCT GCGTCAGGAC GATGGCCGCG AAAAACTCTC GTTGAGTGCT GGCCAGATCC TGTACTTCAG CGACTCGCGG GTCACCATCA ACAACAGCAC CAATGCCGTG GCTGGCAGCG AGCAGACCAT CGACCAAGGC AAGTCTGCCT GGGTGGTCGA TGCCAACTAC ATGATCAACG ACCGCTGGTC GATGGGCGCC ACCTACCAGT GGAACCCCAA CTCGCGCAAA GAAGATTTGG CCAGCCTGCG CACGCGCTAT CTGCTGGACA ACGACGGCAT CATCAACCTG GCGTATCGCT ACCGTCGCAA CCTCATCGAC AACAGCGACC AGCTCAAGCA GGCCGACTTC TCCTTCCTGT ACCCGATCAA TCCCAGCTGG AGCGCGGTCG GTCGGTATTA CTACTCGCTG CAGGACCGTA AGCCGCTGGA AATCATCGGT GGCGTACAGT GGGACAGCTG CTGTCTGGCG GTGCGCGGAC TGGTGCGCCG GTTCGTGCGC AACCGCGACG GGCAGATGGA CAACTCCATC CAGATAGAGT TCGTGCTGAA GGGCTTGAGC TCGTTCGGGC AGAACACGGA CCGCACTTTA CGCCGTGCTA TTCTCGGCTA TTACCGCGAT GACCTATACC TGGTCCCGCC CAGCAATACC ACGACCAATC CGGACGATTA CGATCCGAAC CTGATTCCAT GA
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Protein sequence | MRRALRLLPL PLSIAICLPA MAADKPFNWG LCPTVDPLPG FDGAPAADPK AAEMRQQLPT DIEGDQLSGT STTPQYQGNV ALKRGDQFLG ADNLRMDTET GNYIAEGNVR YQDTSFRMVA DRAEGNQDTD THKVTNIRYQ LVERRGNGDA ESVDLQGQVG QMHRSTYTTC DPSQPIWRVR APEIDVDNGE GFGTARNAVL QIGNVPVLYF PWFKFPIDDR RQTGLLFPQF GLSRRNGFDY LQPIYLNLAP NYDATLLPRY MSKRGFMFGT EFRYLYEGGR GEVTGNYLPN DKLRDKDRGS VFYSGYHNVN SNWQARSSIS WVSDTRYVED FTSRLNGMGS ASSLQSTVGI YGTGETWTAG LMAERWQLTD YTLDERSLPY NRQPRAYFNW EKPFGIFEAG VYAEAVRFTH DDSYFVQPPS PSVPGEANNR DNNDKYVRTN IRNQEYGSGS RLDLKPYVSM PLSGAAWFFT PTLAWRYTAY QLDSTLAKTG PLTGDRSPSR SLPIASVDAG LYFDRETSLL GTNYLNTLEP RMYYLYVPYR DQDDLPVFDT RPFTFSYGQL FRDTRYTGAD RQNDANQLTL AVTSRWLRQD DGREKLSLSA GQILYFSDSR VTINNSTNAV AGSEQTIDQG KSAWVVDANY MINDRWSMGA TYQWNPNSRK EDLASLRTRY LLDNDGIINL AYRYRRNLID NSDQLKQADF SFLYPINPSW SAVGRYYYSL QDRKPLEIIG GVQWDSCCLA VRGLVRRFVR NRDGQMDNSI QIEFVLKGLS SFGQNTDRTL RRAILGYYRD DLYLVPPSNT TTNPDDYDPN LIP
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