| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04558 |
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| Symbol | |
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| ID | 6304728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1217145 |
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| End bp | 1218365 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638502 |
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| Product | xylanase |
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| Protein accession | YP_001912384 |
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| Protein GI | 188575455 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.992142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT CCTTGTCGAT GTTGCGCGGA CTGACCTGCG CGATGGCCGT GCTGCTGGCG
GGCCACGCCT CCGCGCAGAC AGTGACGATC ACGCCCACGC AGACCTATCA GACGGTGCGC
GGGTTCGGCG GCATGAATGG CGCAGGCTGG ATCAACGATC TGACGCCAGC GCAGGTGGAT
CTGGCCTATG GCAGCGGCAA CGGGCAGATC GGGTTGTCGA TCCTGCGCGT GCGTATCGAC
CCATCCAGCT CCGGCTGGGC AATCCAGGTG CCCACGGCGA CACGCGTGCG TGCGTTGGGC
GGGCTGGTGT TCGCAAGCCC ATGGTCGCCG CCGGCCTACA TGAAGTCCAA TAACAGCTTG
ACCAATGGCG GCAAACTGCT GCCGAACTAC TACGGCGCCT ACACCAAGTA CCTGCTGGAT
TTCGCCAATT ACATGTCGGG CAAGGGCGCG CCGCTGTACG CGATTTCCCT GCAAAACGAG
CCGGATTGGC ATCCCAATTA CGAGTCGGCT GGCTGGAACG GCAGCGATTT CGTCAACTAT
CTCGTGAGCG AAGGCAGTAA GTTCGGCGGC CTCAAGGTCA TCGTCGGCGA GTCGGTGGGG
TTCAACTTCT CCATCACCGA CCCGGTCCTC AGCAACGCCA CTGCCAATCA GGCCACCTCC
ATCGTGGCCG GCCATCTGTA TGGCGCGGTG CCGCGCGACT ATGCCTTGGC GCGCAGCAAG
GGCAAGCAGG TGTGGATGAC CGAGCATTAC ACCGACAGCA CCGATGGCAA CGCGTGGCCG
TCGGCATTGG GCGTGGCCAG CGAGTTGCAC GCTAGCATGG TGGCCAATTT CAATGCCTAT
ATCTGGTGGT ACATCCGGCG CAGCTATGGG TTGATCAGCG AGAACGGCGC AGTCAGCAAA
CGCGGTTACG CGATGTCGCA GTTCGCACGC TTCGTGCGGC CCGGCTCGGT GCGCATCGGC
GCCACCGAAC ACCCGTATTC CGATGTCTCT GTCACCGCCT ACCGCACGCC GGACAACAAG
CTGGTGCTGG TGGCGGTCAA CACAGGCACC GGCCATCAGC GCCTGGATCT GACGCTACCG
TCTGGCGCTG CCGCGCAGTT CGCCCGATAC ACCACATCGA GCACGCTCAA TGTCGGTTTT
GGCGGTCACT ACAGCGTGGT TAACGGCAAG ACCTCGCTGT ATGTCGATCC GCAGAGCGTG
ACCACACTGG TCGGCAACTG A
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| Protein sequence | MKKSLSMLRG LTCAMAVLLA GHASAQTVTI TPTQTYQTVR GFGGMNGAGW INDLTPAQVD
LAYGSGNGQI GLSILRVRID PSSSGWAIQV PTATRVRALG GLVFASPWSP PAYMKSNNSL
TNGGKLLPNY YGAYTKYLLD FANYMSGKGA PLYAISLQNE PDWHPNYESA GWNGSDFVNY
LVSEGSKFGG LKVIVGESVG FNFSITDPVL SNATANQATS IVAGHLYGAV PRDYALARSK
GKQVWMTEHY TDSTDGNAWP SALGVASELH ASMVANFNAY IWWYIRRSYG LISENGAVSK
RGYAMSQFAR FVRPGSVRIG ATEHPYSDVS VTAYRTPDNK LVLVAVNTGT GHQRLDLTLP
SGAAAQFARY TTSSTLNVGF GGHYSVVNGK TSLYVDPQSV TTLVGN
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