| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04549 |
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| Symbol | |
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| ID | 6304737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 1224864 |
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| End bp | 1226570 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642638511 |
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| Product | tetratricopeptide repeat domain protein |
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| Protein accession | YP_001912393 |
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| Protein GI | 188575464 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGC AAGTCCCGCG CGCGCTGTTG CAGCTGCGCG AGGCAGTGCG ACGCCAGCCC
GGCGATTTGG TCACGTGGCT GATGCTGGCC GATGCGGAGC TCGGCATGGG TGCGACCGCT
GCCGGCGAGG CGGCCGTGCA GCGCGCGCTG GCGCTGCATC CCGGGCATCC GGAAGCGATC
GCGCGGCTGG GGCGGGTGCG CTGGGCGCAG CAGCGCCATG CAGAAGCGGC CACGTTGCTG
CAGCAAGCCT CGGACCTGGT GCCGCAGCAT CCAGGAATTG CGCTGTGGCT TGGGCATGCG
CTCGAAGATG CAGGCCAACC GGAGCAGGCG GCGGCCGCCT ATACATGTGC ACACCAGCTG
TTGCCCGACG AGCCCTACAT CACCGCGCAA CTGCTCAATT GGCGACGCCG CCTGTGCGAT
TGGCGCGAAC TGGAATCGCT GGCTGCGCGG GTGCGGACTG CAGTGGCGCG CGGCGAGGCG
GCAGTGGAGC CATTCGCGTT CCTGAGCGAG GATGCCAGCG CTGCCGAGCA ACTGGCCTGC
GCCCGCACCC GTGCGCAGGC GATTGCGACC TCTCTGCGCC CGCTGCCAGC GGCAGCAGTG
CGCAGCCGCG GCGCATTGCA ACTCGGCTTC GTGTCCAACG GCTTTGGCGC CCACCCCACC
GGCTTGCTGA CCGTGGCCGT GTTCGAAGCA TTGCAGCACC GCCAGCCGGA CATGCAGGTG
CATCTATTTG CGACCAGCCA CGACGATGGC AGCGAGATTC GCGCCCGCCT GGCACAGGGG
ACGCGCGTAC ACGACGTCAC CGCGCTCGGG CATCTGGCAA CCGCGCAACA CATCCGCGAC
CAGGGTATCG ATCTGCTGTT CGATCTGCGC GGCTGGGGCG GTGGCGGACG TCCGGAAGTG
TTCGCGCTGC GGCCGGCGCC GATACAGATC AACTGGCTGG CATATCCAGG CACCTCGGGC
GCTCCGTGGA TGGACTATGT GCTGGGCGAT GCCGTTGGAT TGCCACCATC GCTGGAGCCG
TTTTACAGCG AACAGGTGCT GCGCCTGCCG CGTGTGTTTC AGCCCTCTGA CACTTCGCGC
ATCGTTGCCG AACCGCCATC GCGTGCGGAG TGCGGGTTAC CTGAGCTGGG CGCGGTGCTG
TGCTGCTTCA ACAACAGTTA CAAGCTCAAT CCACGCAGCA TGGCGCGCAT GCTGGCGGTG
TTGCGTGCGG TGCCCGGCTG CGTGCTGTGG CTGCTGTCTG GACCAGGGGA GGCGAATGCG
CGATTGCGTG CGTTTGCGCA GACACAGGGC GTGGATCCGC AGCGTTTAGT GTTCATGCCG
AAGTTGCCGC ATCCGCGGTA TCTGGCGCGC TATCGGCATG CAGATCTGTT TTTGGATACG
CATCCCTACA ACGCGCATAC CACCGCCTCC GATGCGTTAT GGGCAGGCTG CCCGGTGTTG
ACCACGCCGG GCGAGACTTT CGCTGCGCGT GTGGCTGGCA GCCTCAATCA GCATCTGGGG
CTGGATGAGA TGAATGTTGT CGATGACGCT GCGTTTGTCG CCAAGGCGAT CGCACTGGCG
AGCGATTCGA ATGCCTTGCG TGGCGTGCGT GCGCGTCTGG CTGAACAACG CCTGCGCAGC
GGCGTTTTCG ATATGGACGG ATTTGCGGAT GATCTGGCTG CGCTGTTGCG TGGCGTTGCT
CGGCGCAGTG GATGGTTGGG GGTTTAG
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| Protein sequence | MSAQVPRALL QLREAVRRQP GDLVTWLMLA DAELGMGATA AGEAAVQRAL ALHPGHPEAI
ARLGRVRWAQ QRHAEAATLL QQASDLVPQH PGIALWLGHA LEDAGQPEQA AAAYTCAHQL
LPDEPYITAQ LLNWRRRLCD WRELESLAAR VRTAVARGEA AVEPFAFLSE DASAAEQLAC
ARTRAQAIAT SLRPLPAAAV RSRGALQLGF VSNGFGAHPT GLLTVAVFEA LQHRQPDMQV
HLFATSHDDG SEIRARLAQG TRVHDVTALG HLATAQHIRD QGIDLLFDLR GWGGGGRPEV
FALRPAPIQI NWLAYPGTSG APWMDYVLGD AVGLPPSLEP FYSEQVLRLP RVFQPSDTSR
IVAEPPSRAE CGLPELGAVL CCFNNSYKLN PRSMARMLAV LRAVPGCVLW LLSGPGEANA
RLRAFAQTQG VDPQRLVFMP KLPHPRYLAR YRHADLFLDT HPYNAHTTAS DALWAGCPVL
TTPGETFAAR VAGSLNQHLG LDEMNVVDDA AFVAKAIALA SDSNALRGVR ARLAEQRLRS
GVFDMDGFAD DLAALLRGVA RRSGWLGV
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