| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04546 |
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| Symbol | |
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| ID | 6304740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1229027 |
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| End bp | 1230682 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642638514 |
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| Product | tetratricopeptide repeat family |
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| Protein accession | YP_001912396 |
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| Protein GI | 188575467 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGGTCG CAGTGTCCGT CAACGCCACC GCAGCACCCA AGAAAGCACC GCCCGCTCCG
CCGACCGGCA GTGCCGGCGT CACCTCGCTG GAACCCGTGC TGGCAGGCGA ATTCGCCTTG
CAGGCCGGGC AACTGGACGA TGCCGCCCGC GCCTATCTGG ACGCCGCCAA GGCCGAAGCC
GGCGATGCCG GGCTGGCCGA GCGTGCGGCC CGCATCTCCA TGCTGGCCAA CGACGACCCG
CGTGCGATCG AAGCGCTGGC GTTGTGGCGC GCGCGCGCGC CGTCGTCCAT GTCCATGCGC
AGCACCGAGG CCTCGCTGGC CCTGCGCCGC AACGATCTGC GCATCGCGCG CCGCGACTTG
CTCGGCCTGC TCAAGGAGCA CGACCCGCGC GGCTGGCGCT TTGCGCTGAT CGCCCTGGCC
AATGGCGGCC GCGAGCCGGA AGCCTCGGCC GATGTGCTCG AAGACCTGGT CAAGGCCGGT
GCCATCCCGA ATCAGATCGA AGCCTGGCAG GAATTCGGCC GGCTCGCGCT GCGCATGGAG
CGCCCGGCGC TGGCCAAGCG CATCATCAAC GAAGTGGTGC GCCGTTTCCC CGAAGAGCCG
CGCGTGGCGT TGTTGCACGC TACCCAGCTG CAGCAGGAAG GCAAGGACGA CGAAGCGCTG
GCGCTGCTGA AAAACATCGA GCCAAAGGCG GTCAAGAACT CCGAACTGCG CGGCGCGCTG
GCCTTCGCCT ACGACGCCAT GGGCCAGACC GAAGCCGCGG CACGCGTGCT TTCGACCGGG
CCGCAGGACA CCCAGACCTA CGGCTTGCGC GCCTCGATGC TGGCCAAGGA AAAAGACCGC
AGTTCGTTGG AAGCGCTGTA TACGGAGCTG AAAAGCAATG CCACCAAGCC CGATCCGGAC
CGCCGTCTGC TTCTGGGCAA GATCGCCGAA TTCCTCAAGC GGTACGACGA GGCGGTGGAG
TGGTATCGCG GTGTGCCCGG TGGCCCGCAG CTGAGCGAGG CGCGTCTGCG CGCCGCCAGC
GCGCTGTACG AACTGGGCCG CAAGCCCGAA GCGCTTGCCG CAGCCCGTGC CCTGCAGGGC
GACGCCAGTG CCGACGACGA CGCCCGCCGC GACGCCTACG TGCTCGAGGC CGAGTTGCAT
CAGCGGGCCG ACGATGCGCC GGGCGAATTG GATGCCTTCG AACGCGGCTT GGCGGCTTAT
CCGGACGACA GCGCGCTGCT GTATGCCCGC GGGCTGGCCT GGGAGCGGCG CGACGATGTC
CCGCGTGCCG AGGCCGATCT GCGCAAGATC CTGGTGGCCG AACCGGAAAA CGTCGCCGCG
CTGAACGCGC TGGGCTACAC CTTGGCCGAC CGCACCACGC GTTATAAGGA GGCGTTGGCG
CTGATCGACC GCGCCCGCAC CGCCGACCCG GACAACCTGG CCATCGTCGA TAGCTATGGC
TGGGTGCTGT ATCGCATGGG CCGCACCAAG GAAGCGTTGG TGCAGCTGCG CCGCGCCTGG
GCGCTGGTCA AGGATCCGGA AATCGCGGCC CACGTGGGCG AAGTGCTTTG GGTTAGTGGC
AAGCAGGACG AGGCACGCCG TTACTTCGAT GAAGCGCGCC GCCTCGACCC GGACAACCGT
GCGCTGCAAC GCGCAGTGGA AAAGTTCGGG CTATGA
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| Protein sequence | MLVAVSVNAT AAPKKAPPAP PTGSAGVTSL EPVLAGEFAL QAGQLDDAAR AYLDAAKAEA
GDAGLAERAA RISMLANDDP RAIEALALWR ARAPSSMSMR STEASLALRR NDLRIARRDL
LGLLKEHDPR GWRFALIALA NGGREPEASA DVLEDLVKAG AIPNQIEAWQ EFGRLALRME
RPALAKRIIN EVVRRFPEEP RVALLHATQL QQEGKDDEAL ALLKNIEPKA VKNSELRGAL
AFAYDAMGQT EAAARVLSTG PQDTQTYGLR ASMLAKEKDR SSLEALYTEL KSNATKPDPD
RRLLLGKIAE FLKRYDEAVE WYRGVPGGPQ LSEARLRAAS ALYELGRKPE ALAAARALQG
DASADDDARR DAYVLEAELH QRADDAPGEL DAFERGLAAY PDDSALLYAR GLAWERRDDV
PRAEADLRKI LVAEPENVAA LNALGYTLAD RTTRYKEALA LIDRARTADP DNLAIVDSYG
WVLYRMGRTK EALVQLRRAW ALVKDPEIAA HVGEVLWVSG KQDEARRYFD EARRLDPDNR
ALQRAVEKFG L
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