| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04544 |
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| Symbol | ipk |
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| ID | 6304742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1231332 |
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| End bp | 1232201 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642638516 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001912398 |
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| Protein GI | 188575469 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC CGGGCACTGA TTGGTCGGCG TGGCCTGCGC CGGCCAAGCT CAATCTGTTC
CTGCAGATCA CCGGGCGCCG CGCCGATGGC TATCACCTGC TGCAGACCGT GTTCCGGCTG
CTGGATTGGG GGGACACCAT TCATCTTCGC GTGCGCAGCG ACGGCCAGAT CCTGCGCATT
GGTGAGAGTT TGCCCGGCGT GGCCGAAGAC GATGACCTGG TGATCCGCGC CGCGCGCCTG
CTGCAATCGG CGGCCGGCGC TGCGGCGGGC GCGGAGATTC GGGTCGACAA GCGCATCCCG
GCAGGTGGCG GTTTCGGCGG TGGATCGTCG GACGCGGCGA CTGTGTTGGT GGCGCTCAAT
GCCTTGTGGG GCCTGGCTTT GACGGCGGAT ACGCTGGCCG AATTGGGTCT GCAGCTGGGT
GCGGATGTGC CGGTTTTCGT GCGCGGTCGC AATGCCTGGG CCGAAGGCGT GGGCGAACAG
CTGACCCCGA TTGCCCTCCC GGAAGCGGCC TATCTGCTGG TCGATCCGGG CGTTCACGTG
CCGACACCGG TGTTATTTCG ATCACAGGAA TTGACGCGGG ATGCCGCGCC CGCGAAAATA
ACTGACTTCG CTTCCGGTTC TCTGCTCGAC AATGCGTTCG AGCCGGTTCT GCGGCGCCGC
GAACCTGCCG TCGAGGCAGT GTTCCAGGCG CTTTCCAGGG TCGGCACACC GCGATTGACC
GGGTCGGGAA GTGGCTGTTT CGTCGAATTC GCCACGCGCG CTGCTGCAGA GCAGGCCCTG
GCGCAGTTGC CGGGCAGTCT GCGGGCGTGG GTGGTGGAGG GTGCAGCGCA CTCCCCTCTG
CTCGACGCAC GGGACGCGAT GAAGGTTTGA
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| Protein sequence | MNAPGTDWSA WPAPAKLNLF LQITGRRADG YHLLQTVFRL LDWGDTIHLR VRSDGQILRI
GESLPGVAED DDLVIRAARL LQSAAGAAAG AEIRVDKRIP AGGGFGGGSS DAATVLVALN
ALWGLALTAD TLAELGLQLG ADVPVFVRGR NAWAEGVGEQ LTPIALPEAA YLLVDPGVHV
PTPVLFRSQE LTRDAAPAKI TDFASGSLLD NAFEPVLRRR EPAVEAVFQA LSRVGTPRLT
GSGSGCFVEF ATRAAAEQAL AQLPGSLRAW VVEGAAHSPL LDARDAMKV
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