Gene PXO_04541 details

Gene Information

• Locus tag: PXO_04541
• ID: 6304745
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1233574
• End bp: 1234113
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642638519
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_001912400
• Protein GI: 188575471
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTACGGTG GCGAACTCGA GCCGGTCAGC ATCCAGCTCA ACCACGAGCA GATCTGGCTT 
GCCCAGCAGA ACGAGTGGTT CTACTCGTCC ATCCTGGACC TGAACCTCAA TGGCGACGTG 
CAGCAGGTGC TGCTGCGTGA CATACAGCGC CATCCGTTCA AGCAGCTGAT CATGCACATC 
GACTTCCAGC GCGTCAGCGC CAACCAGAAG CTCAGCGCTG CTGTGCCGCT GCACTTCATC 
AACGAAGAGG CCTCGCCGGC TGGTAAGTCG AGCGAAGTGG TCGTCACCCA TGAGCTCAAC 
GAAGTTCAGG TGGTCTGCCT GCCGAAGGAT CTGCCGGAGT TCATCGAAGT GGACCTCGGT 
GCACTGGAAG TGGGCAACGT GATCCACTTG TCCGAAATCA AGCTGCCGGC CGGTGTCGAA 
ATTCCGGAGC TGAAGCTGGG TAAGGAACGC GACGTAGCAG TGGTGGCTGC CAAGCACGTG 
CGCATCCAAG AAGAAGACGC TGCCGGCGAA GAAGGCAGCG AAGGCGCCGA GACCAAGTAA 

 

Protein sequence

MYGGELEPVS IQLNHEQIWL AQQNEWFYSS ILDLNLNGDV QQVLLRDIQR HPFKQLIMHI 
DFQRVSANQK LSAAVPLHFI NEEASPAGKS SEVVVTHELN EVQVVCLPKD LPEFIEVDLG 
ALEVGNVIHL SEIKLPAGVE IPELKLGKER DVAVVAAKHV RIQEEDAAGE EGSEGAETK