Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04532 |
Symbol | rplJ |
ID | 6304757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1240689 |
End bp | 1241222 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638531 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001912408 |
Protein GI | 188575479 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.165522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCTCA ATCTGTCCCA GAAGCAAGAA GTAGTCGCCG AGCTGGCAGA CGTCGCCGCC AAGGCCCACT CCCTGATCGC CGCCGAATAC GCTGGCACCA CGGTCTCCCA GATGACCGCG ATGCGTAAGC AGGCCCGCGA AACCGGCGTG TTCTTGAAAG TTGTCAAGAA CACCCTGGCT GCGCGAGCCG TTGAAGGTAC TGATTTCGCT GTCGCTGCTG ACAAGCTGGT CGGTCCTTTG CTGTATGCGT TTTCGATGGA GGAGCCCGGC GCAGCCGGTC GCCTGATCAA GGAATTTGCC AAGAGCAACG ACAAGCTGCA GGCCAAGGTC GTGTCCATCG GCGGGGAACT GTTCCCGGCT GGTCACGTCG ACGTGTTGGC CTCGCTGCCG ACCCGTGACC AGGCCCTGGC CATGCTGGCC CGCGTGCTGT CCGAACCGGC TGCCATGTTC GCCCGTGCCG TCAAGGCCGT CGGCGACAAG CAGGGCGGTG GCGACGCAGC CGCCGCGGCG GTCGCCGAGA CTGCCGAAGC TTGA
|
Protein sequence | MALNLSQKQE VVAELADVAA KAHSLIAAEY AGTTVSQMTA MRKQARETGV FLKVVKNTLA ARAVEGTDFA VAADKLVGPL LYAFSMEEPG AAGRLIKEFA KSNDKLQAKV VSIGGELFPA GHVDVLASLP TRDQALAMLA RVLSEPAAMF ARAVKAVGDK QGGGDAAAAA VAETAEA
|
| |