| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04528 |
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| Symbol | rpsL |
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| ID | 6304761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1250680 |
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| End bp | 1251054 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642638535 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001912412 |
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| Protein GI | 188575483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000336955 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACGA TCAATCAGCT GGTCCGCAAG CCTCGGCAAG CGACCACCTA CAAGAGTGCC
TCCCCGGCAC TGGACAAGTG TCCGCAGCGC CGCGGCGTCT GCACACGCGT CTACACCACC
ACACCGAAGA AGCCGAACTC GGCCTTGCGT AAAGTCGCCA AGGTGCGTCT GACGAATCAG
GAAGAGGTCA TCAGCTACAT AGGTGGTGAA GGCCACAACC TGCAGGAGCA CTCCGTGGTC
CTGATTCGCG GTGGCCGCGT CAAGGATCTT CCCGGTGTGC GTTATCACAC CGTCCGTGGT
TCGCTGGACG CCGCCGGCGT CGCAAAGCGT CGTCAAGGTC GTTCCAAGTA CGGCGCCAAG
CGCCCGAAGA GCTAA
|
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| Protein sequence | MTTINQLVRK PRQATTYKSA SPALDKCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNQ
EEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDAAGVAKR RQGRSKYGAK
RPKS
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