Gene PXO_04520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_04520 
SymbolrplD 
ID6304769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand+ 
Start bp1257796 
End bp1258401 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID642638543 
Product50S ribosomal protein L4 
Protein accessionYP_001912420 
Protein GI188575491 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000000775188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCG TTATCACGGG TAGCAACAAC AAGGTCTCGG TCTCCGAAGC CGTGTTTGGT 
CGCGAATTCA GCGAAGATCT GGTTCACCAG GTCGTCGTTG CTTATCGCAA CGCCGGCCGC 
GCCGGTACCA AGGCACAGAA GACGCGTTCG GAAGTTGCGG GCACGACCAA GAAGTCGAAG 
AAGCAGAAGG GTGGCGGTGC GCGTCATGGC GCGCTGACGG CTCCGATCTT CGTCGGCGGC 
GGCGTGACCT TCGCGGCCAA GCCGCGAAGC TTCGAGCAGA AGGTCAACCG CAAGATGTAC 
CGAGCGGCCA TCTGCGCGAT CTTCTCCGAG CTGAACCGTC AGGGCCGTCT GATGATCGTG 
GACGCGTTCG ACCTCGAAGC GACCAAGACC AAGGACCTGA TCGAAAAGCT CAAGGGACTG 
GATGTGGGCA AGCGCCCGCT GATCGTCACT GAAGAAGCTT CCGAGCACCT GTATCTGTCC 
GCCCGCAATC TGCCGTATGT GCAGGTGCGT GACGTGCAGG GTCTGGATCC GGTCGCTCTG 
GTCGGGGCCG ATACGGTCGT GATCACCGCC GATGCGGTCA AGAAGGTCGA GGAGTGGCTG 
GCATGA
 
Protein sequence
MELVITGSNN KVSVSEAVFG REFSEDLVHQ VVVAYRNAGR AGTKAQKTRS EVAGTTKKSK 
KQKGGGARHG ALTAPIFVGG GVTFAAKPRS FEQKVNRKMY RAAICAIFSE LNRQGRLMIV 
DAFDLEATKT KDLIEKLKGL DVGKRPLIVT EEASEHLYLS ARNLPYVQVR DVQGLDPVAL 
VGADTVVITA DAVKKVEEWL A