| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_04515 |
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| Symbol | rpsC |
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| ID | 6304774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 1260177 |
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| End bp | 1260911 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642638548 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001912425 |
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| Protein GI | 188575496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000471597 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCATA AAGTTCATCC GACTGGAATC CGTCTTGGTA TCTCCAAAGA CTGGAACTCC
AAGTGGTACG CAAACAAGGG CGATTTCGCT GCCTATCTGG CAGCCGACCT GAAAGTGCGT
GAAATGCTGC GCAAGAAGCT CGCGCAGGCA GGTGTCAGCA AGATCTTGAT CGAGCGCCCT
GCCAAAACCG CCCGCGTGAC CATTCACACC GCCCGTCCGG GTGTGGTGAT CGGCAAGCGT
GGCGAGGATA TCGAAAAGCT ACGTAAGGAA GTGAGCGAGC TGATGGGCGT TCCGGCGCAC
ATCAACGTCA CCGAAGTGCG CAAGCCGGAG CTGGATGCGC AGTTGGTCGC CGAGTCGATC
GCGCAGCAGC TTGAGCGTCG CATCATGTTC CGCCGTGCAA TGAAGCGCTC GGTCGGTAAC
GCGATGCGCC TGGGCGCCCT GGGCATCAAG GTCAATGTGG CTGGACGCCT CAACGGTGCA
GAAATCGCCC GTTCGGAATG GTACCGCGAA GGCCGCGTGC CGCTGCACAC GCTACGTGCC
GACATTGATT ACGGTTTTGC CGAAGCGTCC ACGACGTACG GCATCATCGG TATCAAGGTC
TGGATCTATA AGGGCGAAGT CTTCGACTTC TCTCAGGTTG GCCAGGAAAA GCAGGACGAC
AGCCCGCGCA ACGATCGTAA CGATCGCGGC GACCGCGGTG ACCGCCCGTC GCGCCCGGCT
CGTGAAGCGA GGTAA
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| Protein sequence | MGHKVHPTGI RLGISKDWNS KWYANKGDFA AYLAADLKVR EMLRKKLAQA GVSKILIERP
AKTARVTIHT ARPGVVIGKR GEDIEKLRKE VSELMGVPAH INVTEVRKPE LDAQLVAESI
AQQLERRIMF RRAMKRSVGN AMRLGALGIK VNVAGRLNGA EIARSEWYRE GRVPLHTLRA
DIDYGFAEAS TTYGIIGIKV WIYKGEVFDF SQVGQEKQDD SPRNDRNDRG DRGDRPSRPA
REAR
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