Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04504 |
Symbol | rplR |
ID | 6304784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1264626 |
End bp | 1264985 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642638558 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_001912435 |
Protein GI | 188575506 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0673327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCA ACAAAAACAT CGCCCGTCTG CGTCGCGCCA AGTCCACCCG CTCGCACATC CGTGACCTGG GCGTCGCCCG TCTGTCGGTG CTGCGCACAG GTCAGCATCT GTACGCGCAG GTCTTCACTG CCGACGGTTC CAAGGTGATC GCTGCGGCGA ACACCCTGCA GGCCGACGTC AAGGATGGCC TGAAGAATGG CAAGAACAGC GATGCGGCCG TCAAGGTCGG CAAGCTGATC GCCGAGCGCG CCAAGGCTGC CGGTATCGAG AAGGTCGCAT TCGACCGCTC GGGCTACCGC TACCACGGTC GCATCAAGGC GCTTGCCGAC GCTGCGCGCG AAGGCGGCCT GCAGTTCTAA
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Protein sequence | MSINKNIARL RRAKSTRSHI RDLGVARLSV LRTGQHLYAQ VFTADGSKVI AAANTLQADV KDGLKNGKNS DAAVKVGKLI AERAKAAGIE KVAFDRSGYR YHGRIKALAD AAREGGLQF
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