Gene PXO_04503 details

Gene Information

• Locus tag: PXO_04503
• Symbol: rpsE
• ID: 6304785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xanthomonas oryzae pv. oryzae PXO99A
• Kingdom: Bacteria
• Replicon accession: NC_010717
• Strand: +
• Start bp: 1265144
• End bp: 1265686
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642638559
• Product: 30S ribosomal protein S5
• Protein accession: YP_001912436
• Protein GI: 188575507
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.271958
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAG AACGTGCACC GCGGGGTCGT GATCGCGACC GTAACCGCGA AGAGAAAGTC 
GACGATGGCA TGATCGAAAA GCTGGTCGCG GTCAATCGCG TCAGCAAGAC GGTCAAGGGC 
GGTCGCCAGT TCACCTTCAC CGCGCTGACC GTGGTCGGCG ATGGTCTGGG CAAGGTCGGT 
TTCGGTTATG GCAAGGCGCG CGAAGTGCCG GTCGCCATCC AGAAGTCGAT GGAACAGGCG 
CGCAAGAACC TGGCCACTGT GGATCTGAAC AACGGCACCT TGTGGCATGC CGTCAAGTCG 
GGCCATGGTG CAGCACGCGT CTACATGCAG CCGGCTTCGG AAGGTACGGG CGTCATCGCA 
GGCGGCGCCA TGCGCGCTGT GCTCGAAGCG GTCGGCGTCA AGAACGTGCT GGCCAAGGCA 
GTTGGTTCGC GCAACCCGAT CAACCTGGTC CGCGCAACCC TGAAGGGTCT GTCGGAAGTG 
CAGTCGCCGG CCCGTGTTGC GGCCAAGCGT GGCAAGAAGG TGGAGGAGCT CAACCATGGC 
TAA 

 

Protein sequence

MAEERAPRGR DRDRNREEKV DDGMIEKLVA VNRVSKTVKG GRQFTFTALT VVGDGLGKVG 
FGYGKAREVP VAIQKSMEQA RKNLATVDLN NGTLWHAVKS GHGAARVYMQ PASEGTGVIA 
GGAMRAVLEA VGVKNVLAKA VGSRNPINLV RATLKGLSEV QSPARVAAKR GKKVEELNHG