Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04502 |
Symbol | rpmD |
ID | 6304786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1265679 |
End bp | 1265870 |
Gene Length | 192 bp |
Protein Length | 63 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642638560 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001912437 |
Protein GI | 188575508 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.17741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG ACACCAACAA GACCGTGAAG GTGCGCCTGG TGCGCGGCCT GCGTGGAACC CAGTCGCGTC ACCGCCTGTC GGTGCGTGCG TTGGGCTTGA ATAAGCTCAA CGATGTGCGT GAACTGAAGG ACAGCCCGCA GGTGCGTGGT CTGATCAATA CGGTTCACTA CCTCGTCAAG GTTGAGGAGT AA
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Protein sequence | MAKDTNKTVK VRLVRGLRGT QSRHRLSVRA LGLNKLNDVR ELKDSPQVRG LINTVHYLVK VEE
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